SGN Marker TG626

SGN-M195

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
900
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
Forward sequence
TAACTCTCACCTTTCTTTTGAGAATTATCATCAGGATAAAATCCTGGCCTCGGTGCCTGCAATAAGAATTAAAATTACCCAAGTACTTCG
TGACTGAGCAGAAAACCATTATGCATAGTGTGATAAGCATGTCTGCAAGGGTGATCACATCTATCTTTATTGAGAGAGATTTAAAAAATG
AGTCTATTGAGTCAAAGATGCTGGGGAAGGGAGAAATTTTAGGTGGTGTTTAAAGAAACACAAAGTAGCCAGTTAAAATGTAAAAAACTA
AAACTTAATGCCGACTGTCTAGTATACTAAAACAAGACAATTATGTCCAAGGAAAAGCTGAAACTTAACCCTACCATGGCAGCAGGGGCC
ATTGGCAATGCTACACCATATCGGTCCATAAGTGGTGGCACACCATACATCCCACCTGTAAGCCAGAAAGGTACAGTCACAACATCATTA
TGGAACAACTGAAACTATATTTGACTGAATACTGCTGTTTGGATGGATGACATTAACACAAAATAGGAATGGACAAAATGAACACTATAT
TATGCAATATGTTAATGACCTGGAAACTGCACTACATTACCAAAATATAAACATGCAAGCAGCATTCTTCATTTTTTTAAAACTTAAAAT
TGGTTGAGATTAAGAATACATACCATTTCCCA
Reverse sequence
TTAGGCCCATGCATGCTCCACTGAGCTATTCACCCTCAGCTGCATATGTTGGGTCTGGTGCTCCCTCTTCAATGTATATGGGTGTAGCAC
CATATGGTGGTTCTTTGTTCAATGGACCATCCATGCCAGCCTATGACGTTCCCTTTGCTGGAGGTTCTGCTTATCATTACAATTTTGGGA
GCCGCCTTTCTGGGGGGAGCCCGTACCGCCCGGTACATCTCTCCGCTCCACCTCCTTACACTGGTGGGATGGGAAATGGTATGTATTCTT
AATCTCAACCAATTTTAAGTTTTAAAAAAATGAAGAATGCTGCTTGCATGTTTATATTTTGGTAATGTAGTGCAGTTTCCAGGTCATTAA
CATATTGCATAATATAGTGTTCATTTTGTCCATTCCTATTTTGTGTTAATGTCATCCATCCAAACAGCAGTATTCAGTCAAATATAGTTT
CAGTTGTTCCATAATGATGTTGTGACTGTACCTTTCTGGCTTACAGGTGGGATGTATGGTGTGCCACCACTTATGGACCGATATGGTGTA
GCATTGCCAATGGCCCCTGCTGCCATGGTAGGGTTAAGT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1464918.8e-1947 (7.1% of RFLP seq)+
SGN-U1464916.6e-3273 (11.0% of RFLP seq)+
SGN-U1464915.7e-3273 (12.6% of RFLP seq)-
SGN-U1618761.5e-3583 (14.3% of RFLP seq)-
SGN-U1464911e-143260 (44.9% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 8539)
Chromosome
5
Position
42.80 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG626 was used as an overgo probe on plate 14 [well D6]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
TGGCAATGCTACACCATATCGGTC
B sequence
TGTGCCACCACTTATGGACCGATA
AB sequence
TGGCAATGCTACACCATATCGGTCCATAAG
Marker sequence
TAACTCTCACCTTTCTTTTGAGAATTATCATCAGGATAAAATCCTGGCCT
CGGTGCCTGCAATAAGAATTAAAATTACCCAAGTACTTCGTGACTGAGCA
GAAAACCATTATGCATAGTGTGATAAGCATGTCTGCAAGGGTGATCACAT
CTATCTTTATTGAGAGAGATTTAAAAAATGAGTCTATTGAGTCAAAGATG
CTGGGGAAGGGAGAAATTTTAGGTGGTGTTTAAAGAAACACAAAGTAGCC
AGTTAAAATGTAAAAAACTAAAACTTAATGCCGACTGTCTAGTATACTAA
AACAAGACAATTATGTCCAAGGAAAAGCTGAAACTTAACCCTACCATGGC
AGCAGGGGCCATTGGCAATGCTACACCATATCGGTCCATAAGTGGTGGCA
CACCATACATCCCACCTGTAAGCCAGAAAGGTACAGTCACAACATCATTA
TGGAACAACTGAAACTATATTTGACTGAATACTGCTGTTTGGATGGATGA
CATTAACACAAAATAGGAATGGACAAAATGAACACTATATTATGCAATAT
GTTAATGACCTGGAAACTGCACTACATTACCAAAATATAAACATGCAAGC
AGCATTCTTCATTTTTTTAAAACTTAAAATTGGTTGAGATTAAGAATACA
TACCATTTCCCA
Genomic location of TG626  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D195 marker 195
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