SGN Marker TG626
SGN-M195
Synonyms |
Locus associations |
RFLP details |
Insert size
900
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TAACTCTCACCTTTCTTTTGAGAATTATCATCAGGATAAAATCCTGGCCTCGGTGCCTGCAATAAGAATTAAAATTACCCAAGTACTTCG
TGACTGAGCAGAAAACCATTATGCATAGTGTGATAAGCATGTCTGCAAGGGTGATCACATCTATCTTTATTGAGAGAGATTTAAAAAATG AGTCTATTGAGTCAAAGATGCTGGGGAAGGGAGAAATTTTAGGTGGTGTTTAAAGAAACACAAAGTAGCCAGTTAAAATGTAAAAAACTA AAACTTAATGCCGACTGTCTAGTATACTAAAACAAGACAATTATGTCCAAGGAAAAGCTGAAACTTAACCCTACCATGGCAGCAGGGGCC ATTGGCAATGCTACACCATATCGGTCCATAAGTGGTGGCACACCATACATCCCACCTGTAAGCCAGAAAGGTACAGTCACAACATCATTA TGGAACAACTGAAACTATATTTGACTGAATACTGCTGTTTGGATGGATGACATTAACACAAAATAGGAATGGACAAAATGAACACTATAT TATGCAATATGTTAATGACCTGGAAACTGCACTACATTACCAAAATATAAACATGCAAGCAGCATTCTTCATTTTTTTAAAACTTAAAAT TGGTTGAGATTAAGAATACATACCATTTCCCA |
Reverse sequence
TTAGGCCCATGCATGCTCCACTGAGCTATTCACCCTCAGCTGCATATGTTGGGTCTGGTGCTCCCTCTTCAATGTATATGGGTGTAGCAC
CATATGGTGGTTCTTTGTTCAATGGACCATCCATGCCAGCCTATGACGTTCCCTTTGCTGGAGGTTCTGCTTATCATTACAATTTTGGGA GCCGCCTTTCTGGGGGGAGCCCGTACCGCCCGGTACATCTCTCCGCTCCACCTCCTTACACTGGTGGGATGGGAAATGGTATGTATTCTT AATCTCAACCAATTTTAAGTTTTAAAAAAATGAAGAATGCTGCTTGCATGTTTATATTTTGGTAATGTAGTGCAGTTTCCAGGTCATTAA CATATTGCATAATATAGTGTTCATTTTGTCCATTCCTATTTTGTGTTAATGTCATCCATCCAAACAGCAGTATTCAGTCAAATATAGTTT CAGTTGTTCCATAATGATGTTGTGACTGTACCTTTCTGGCTTACAGGTGGGATGTATGGTGTGCCACCACTTATGGACCGATATGGTGTA GCATTGCCAATGGCCCCTGCTGCCATGGTAGGGTTAAGT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U146491 | 8.8e-19 | 47 (7.1% of RFLP seq) | + |
SGN-U146491 | 6.6e-32 | 73 (11.0% of RFLP seq) | + |
SGN-U146491 | 5.7e-32 | 73 (12.6% of RFLP seq) | - |
SGN-U161876 | 1.5e-35 | 83 (14.3% of RFLP seq) | - |
SGN-U146491 | 1e-143 | 260 (44.9% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG626 was used as an overgo probe on plate 14 [well D6]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TGGCAATGCTACACCATATCGGTC
|
B sequence
TGTGCCACCACTTATGGACCGATA
|
AB sequence
TGGCAATGCTACACCATATCGGTCCATAAG
|
Marker sequence
TAACTCTCACCTTTCTTTTGAGAATTATCATCAGGATAAAATCCTGGCCT
CGGTGCCTGCAATAAGAATTAAAATTACCCAAGTACTTCGTGACTGAGCA GAAAACCATTATGCATAGTGTGATAAGCATGTCTGCAAGGGTGATCACAT CTATCTTTATTGAGAGAGATTTAAAAAATGAGTCTATTGAGTCAAAGATG CTGGGGAAGGGAGAAATTTTAGGTGGTGTTTAAAGAAACACAAAGTAGCC AGTTAAAATGTAAAAAACTAAAACTTAATGCCGACTGTCTAGTATACTAA AACAAGACAATTATGTCCAAGGAAAAGCTGAAACTTAACCCTACCATGGC AGCAGGGGCCATTGGCAATGCTACACCATATCGGTCCATAAGTGGTGGCA CACCATACATCCCACCTGTAAGCCAGAAAGGTACAGTCACAACATCATTA TGGAACAACTGAAACTATATTTGACTGAATACTGCTGTTTGGATGGATGA CATTAACACAAAATAGGAATGGACAAAATGAACACTATATTATGCAATAT GTTAATGACCTGGAAACTGCACTACATTACCAAAATATAAACATGCAAGC AGCATTCTTCATTTTTTTAAAACTTAAAATTGGTTGAGATTAAGAATACA TACCATTTCCCA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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