SGN Marker T1492
SGN-M2043
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TPTAW36TH
Arabidopsis best BAC match: AL022224.1
Arabidopsis position: 4.1050000
Arabidopsis identities: 0.808
Best GenBank protein hit: CAB79012.1
Evalue: 3.8e-26
Identities: 0.445
Description: hypothetical protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TPTAW36TH
Arabidopsis best BAC match: AL022224.1
Arabidopsis position: 4.1050000
Arabidopsis identities: 0.808
Best GenBank protein hit: CAB79012.1
Evalue: 3.8e-26
Identities: 0.445
Description: hypothetical protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1492 was used as an overgo probe on plate 12 [well A2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
AAGATACTCCCGCTTCTCAGTTGG
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B sequence
TCAGGATCTGCCAGTTCCAACTGA
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AB sequence
AAGATACTCCCGCTTCTCAGTTGGAACTGG
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Marker sequence
GCTCTCTCACTGACAGTAGAGTGGATAACGTTTCAAGAACCCAAATTCCA
TCGATGTATGAATCTTCTTTACTGAAATTCCACTAAATTTTTAGCTCACT CTCAAGAATGGTTTCATCCACCATTCTAATTCAGCAACCGACGAACTTCT TCCACCAGCCAGAGCTTCACCATCAGCTATGGAGAGGTCTGCAGCATGGA TGTGTTGCATCATTGCAGAAACAACCTATTTTGGTATGTAATAGTAACAA GAGAAACAGACCTTTGAGAGTTTCTTCAAGTGCTAATGGTGCTGTTACTT CTTCCACTTTGGAGGCCTATGATTCTTCTCCGTCTCCTTCTGCATTTCCT CTTTTTACACCCCCTTCTCAACCCCAAGATACTCCCGCTTCTCAGTTGGA ACTGGCAGATCCTGATTTCTACAAAATAGGTTATGTTAGAAGTTTTCGAG CCTACGGGATTGAATTCAGGGAGGGACCACATGGGTATGGAGTGTTTGCT TCCAAAGACGTGGAACCTCTCCGTCGAGCTAGGGTAATAATGGAAATTCC TTTAAAACTTATGTTAACCATAAGC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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