SGN Marker TG279
SGN-M216
Synonyms |
Locus associations |
RFLP details |
Insert size
900
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG279 image not available
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Forward sequence
ACCATCTCAACAGACTAGGTCCTCCTTATGCATTGCCTGTAGAATCCGCTGTCGCTTCATCTTTGGAAAATATAGATCATAAGGGGGTAG
GTCCCTTCCGAGGGGGCAAGAATGGTGGCCATGGCAAAGGTCGCCGGCTGGCAAATGGGATGATTTCTACTACCTCTAGGAAACTCAGGA ATCTGGAAAAGTCAAATGAGGGGTCAGATGATGCAATTTCAAACATAGAAGGGCCAGCTCAGTTTTCCAGGCATCCAGTACATGCTGCAC CAGGAAAAGATCTTGAAACTGGTCTTCAACCTTTAAATCTCAATGACTCTGGCTATGCTACCTCCTTGTTAGATAGAAATTTGCCCATAT ACATGAACTGCCCCCATTGCATGGAGTTGAAGAGTAAGAATGACCAAACAGATGCGAGATTTGCAGGAACCATTTCACAGCTCCAGAGGA TCTTTCTGGTTGGAGTCTTACTTCT |
Reverse sequence
AAGAGGTGCCAATTTCTACGTTATGTTATTTGCAAGTAACCCACTTCTCTAGTTACCCACAATTTCAATGTGTTAGCTAACATGCCACAT
TTCACTGTATTTCACTAGAAATAGGTCCTTTAAACAGAAAATATTAAATAGTATCCAACTATAAGTTGAATAGAGAAGACCAACAGATCT CTAATATCTTATATTTCCTTTAAATTTCCTCATACGCAGCCTTGGCCATGAATAGACTGCTGATATGTCCACGAAGTCGGTGAAAATAAG CAAATGAATTTACAAAAACAGGGTAAGTGCAGATATCTTAAAACACATGTTTACATTATGAGTTGTCTCTTAATCCACTCATAATTGGTT TAGGCACTCAACACATAAAACCATATCATCTAAGCCTGTTCATTAGATTAATAGAAACAATGGATGAGATAAGCACTTAAAAATGACATC ACATAAAAAAGATACTTCTTTATGAGGTCATAAAGATTCAGGGAAGTTGAGG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U167515 | 7e-179 | 331 (69.7% of RFLP seq) | + |
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| ![]() Tomato-EXPIMP 2009 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Other PCR data |
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Overgo hybridization and physical mapping |
TG279 was used as an overgo probe on plate 4 [well A5]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GACTAGGTCCTCCTTATGCATTGC
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B sequence
ACAGCGGATTCTACAGGCAATGCA
|
AB sequence
GACTAGGTCCTCCTTATGCATTGCCTGTAG
|
Marker sequence
ACCATCTCAACAGACTAGGTCCTCCTTATGCATTGCCTGTAGAATCCGCT
GTCGCTTCATCTTTGGAAAATATAGATCATAAGGGGGTAGGTCCCTTCCG AGGGGGCAAGAATGGTGGCCATGGCAAAGGTCGCCGGCTGGCAAATGGGA TGATTTCTACTACCTCTAGGAAACTCAGGAATCTGGAAAAGTCAAATGAG GGGTCAGATGATGCAATTTCAAACATAGAAGGGCCAGCTCAGTTTTCCAG GCATCCAGTACATGCTGCACCAGGAAAAGATCTTGAAACTGGTCTTCAAC CTTTAAATCTCAATGACTCTGGCTATGCTACCTCCTTGTTAGATAGAAAT TTGCCCATATACATGAACTGCCCCCATTGCATGGAGTTGAAGAGTAAGAA TGACCAAACAGATGCGAGATTTGCAGGAACCATTTCACAGCTCCAGAGGA TCTTTCTGGTTGGAGTCTTACTTCT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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