SGN Marker T1649
SGN-M2160
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 98
Tomato EST read: None
Arabidopsis best BAC match: AP000371.1
Arabidopsis position: 3.0920000
Arabidopsis identities: 0.600
Best GenBank protein hit: AAD37373.1
Evalue: 1.5e-40
Identities: 0.666
Description: NADPH:quinone oxidoreductase [Arabidopsis thaliana]
Comment: Experimental evidence lacking.
More information about COS markers can be found on the COS markers page.
Tomato EST read: None
Arabidopsis best BAC match: AP000371.1
Arabidopsis position: 3.0920000
Arabidopsis identities: 0.600
Best GenBank protein hit: AAD37373.1
Evalue: 1.5e-40
Identities: 0.666
Description: NADPH:quinone oxidoreductase [Arabidopsis thaliana]
Comment: Experimental evidence lacking.
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1649 was used as an overgo probe on plate 9 [well D5]
Plausible BAC Matches: P077N09, P140O23
Overgo Sequences
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A sequence
TGCCGTTTCTGAACACGGATCTTG
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B sequence
TAAGTCCCGTCCACTTCAAGATCC
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AB sequence
TGCCGTTTCTGAACACGGATCTTGAAGTGG
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Marker sequence
AATCAAAGTAGCTGGGCTTTGCGGTTCCCTCCGTAAAGGTTCCTACAATC
ATGGTCTCCTCAATGCCGCGATGGAGATATGCAAGGATTCTATAACGGGA ATGGAGATCGAGTACGTCGATATATCGCCGCTGCCGTTTCTGAACACGGA TCTTGAAGTGGACGGGACTTATCCCCCGGCTGTCGAGGCTTTTCGTAAGA AAATTGAAGAAGCTGATTGCTTCCTTTTTGCTTCTCCAGAGTACAATTAC TCCATCACAGGACCGTTGAAGAAAGCAATTGATTGGGCCTCTCGACCTCC AAATGTTTGGGCTGATCAAGCAACAGCAATGGTGA |
| Genomic location of T1649
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| User comments |
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