SGN Marker T1649
SGN-M2160
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 98
Tomato EST read: None
Arabidopsis best BAC match: AP000371.1
Arabidopsis position: 3.0920000
Arabidopsis identities: 0.600
Best GenBank protein hit: AAD37373.1
Evalue: 1.5e-40
Identities: 0.666
Description: NADPH:quinone oxidoreductase [Arabidopsis thaliana]
Comment: Experimental evidence lacking.
More information about COS markers can be found on the COS markers page.
Tomato EST read: None
Arabidopsis best BAC match: AP000371.1
Arabidopsis position: 3.0920000
Arabidopsis identities: 0.600
Best GenBank protein hit: AAD37373.1
Evalue: 1.5e-40
Identities: 0.666
Description: NADPH:quinone oxidoreductase [Arabidopsis thaliana]
Comment: Experimental evidence lacking.
More information about COS markers can be found on the COS markers page.
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1649 was used as an overgo probe on plate 9 [well D5]
Plausible BAC Matches: P140O23, P077N09
Overgo Sequences
|
A sequence
TGCCGTTTCTGAACACGGATCTTG
|
|
B sequence
TAAGTCCCGTCCACTTCAAGATCC
|
|
AB sequence
TGCCGTTTCTGAACACGGATCTTGAAGTGG
|
|
Marker sequence
AATCAAAGTAGCTGGGCTTTGCGGTTCCCTCCGTAAAGGTTCCTACAATC
ATGGTCTCCTCAATGCCGCGATGGAGATATGCAAGGATTCTATAACGGGA ATGGAGATCGAGTACGTCGATATATCGCCGCTGCCGTTTCTGAACACGGA TCTTGAAGTGGACGGGACTTATCCCCCGGCTGTCGAGGCTTTTCGTAAGA AAATTGAAGAAGCTGATTGCTTCCTTTTTGCTTCTCCAGAGTACAATTAC TCCATCACAGGACCGTTGAAGAAAGCAATTGATTGGGCCTCTCGACCTCC AAATGTTTGGGCTGATCAAGCAACAGCAATGGTGA |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1649
|
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
