SGN Marker T1660
SGN-M2171
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 5.01
Tomato EST read: None
Arabidopsis best BAC match: AF069299.1
Arabidopsis position: 4.0020000
Arabidopsis identities: 0.895
Best GenBank protein hit: BAA96366.1
Evalue: 1.7e-37
Identities: 0.925
Description: cytoplasmic ribosomal protein S13 [Panax ginseng]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: None
Arabidopsis best BAC match: AF069299.1
Arabidopsis position: 4.0020000
Arabidopsis identities: 0.895
Best GenBank protein hit: BAA96366.1
Evalue: 1.7e-37
Identities: 0.925
Description: cytoplasmic ribosomal protein S13 [Panax ginseng]
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
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Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1660 was used as an overgo probe on plate 10 [well E9]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
CGGCTCTTCCTTACAAGAGAACTC
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B sequence
TTAAGCCAACTGGGAGGAGTTCTC
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AB sequence
CGGCTCTTCCTTACAAGAGAACTCCTCCCA
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Marker sequence
CAATTTGAGCAACACAGTTCAGTGAGCTCACTCTAATCTTCGCCTGGGTC
GTATGCACAGTCGCGGTAAGGGTATCTCAACGTCGGCTCTTCCTTACAAG AGAACTCCTCCCAGTTGGCTTAAGATCTCTGCTCCAGATGTGGAGGACAA TATCTGCAAGTTTGCGAAAAAAGGACTGACACCTTCACAAATTGGTGTGA TTCTTCGGGATTCTCATGGAATTGCTCAAGTCAAGAGTGTCACCGGGAGC AAGATTTTGCGTATCCTCAAAGCTCACGGACTTGCT |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of T1660
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| User comments |
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