SGN Marker T1662
SGN-M2172
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TRZBC76TH
Arabidopsis best BAC match: AF069442.1
Arabidopsis position: 4.0180000
Arabidopsis identities: 0.700
Best GenBank protein hit: AAC79106.1
Evalue: 5.4e-23
Identities: 0.401
Description: putative inhibitor of apoptosis [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TRZBC76TH
Arabidopsis best BAC match: AF069442.1
Arabidopsis position: 4.0180000
Arabidopsis identities: 0.700
Best GenBank protein hit: AAC79106.1
Evalue: 5.4e-23
Identities: 0.401
Description: putative inhibitor of apoptosis [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1662 was used as an overgo probe on plate 9 [well G4]
Plausible BAC Matches: P279D09
Overgo Sequences
A sequence
AGGCATAGATGGAAGCTATGCCAG
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B sequence
AAAGTCGGTCAGTTGGCTGGCATA
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AB sequence
AGGCATAGATGGAAGCTATGCCAGCCAACT
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Marker sequence
GGATCTTCTCTACTCTTTCTCTAATCTCCATGCTCTTAGATTTATCCTAC
CCTTTGATTTGCTCAAAACTTTTTAGCTCTAAATCTGGGTAGATGGAAGC AGGAAAAGAATGCCACGGAAGATTTACCTTAGGCAGGCTAGTTCATTAAG GAAAGAGAGAGAACCAGATTGAAACTTCAGCCAAATCCAAGGAGGATATG ACCAAATTAAAAGCTGAAAGTAGTTTACAAAAGTATAAAGATGATATTGA AAGGCTAGAAAAGGAAATATCCCAGCTCAGACCTAAAGACTGATTCTTCA AAGATAGCTGCTCTTAAAAGAGGCATAGATGGAAGCTATGCCAGCCAACT GACCGACTTTAGAAATGCTCCATTACCAAAAGACACTCAAATCCCTTATA TCTCCACATTTGTGACAGATTTTGAGGAATATTCTCAGGATGGAGGGGTG AAACCAGAACCCGAGTGTGTCATGTGCTTGTCCGAGGAGATGTCTGTGGT TTTTCTGCCATGTGCTCATCAAGTGGTATGCACGACATGCAACGAACTTC ATGAGAAGCAAGGGATGAAAGAATGTCCTTCTTGTANGAGCCTGATC |
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User comments |
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