SGN Marker T1721
SGN-M2223
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
| Synonyms |
| Locus associations |
| COS information |
MIPS Category: 99
Tomato EST read: TRZBI14TH
Arabidopsis best BAC match: AF077407.1
Arabidopsis position: 5.0590000
Arabidopsis identities: 0.852
Best GenBank protein hit: AAC26247.2
Evalue: 5.0e-24
Identities: 0.830
Description: Arabidopsis thaliana CLC-d chloride channel protein
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TRZBI14TH
Arabidopsis best BAC match: AF077407.1
Arabidopsis position: 5.0590000
Arabidopsis identities: 0.852
Best GenBank protein hit: AAC26247.2
Evalue: 5.0e-24
Identities: 0.830
Description: Arabidopsis thaliana CLC-d chloride channel protein
Comment:
More information about COS markers can be found on the COS markers page.
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
| Overgo hybridization and physical mapping |
T1721 was used as an overgo probe on plate 15 [well G1]
Plausible BAC Matches: None
Overgo Sequences
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A sequence
GCCAACTAGGACTGAGGCACTTAC
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B sequence
GGACGTGGAACAACAAGTAAGTGC
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AB sequence
GCCAACTAGGACTGAGGCACTTACTTGTTG
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Marker sequence
AAACCCATCTCCGTATGTAGTCCCAGAAGACATGTCATTAACAAAGGTAT
ATAATCTTTTTCGCCAACTAGGACTGAGGCACTTACTTGTTGTTCCACGT CCTGCTCGTGTTATTGGCATGATCACTCGAAAAGATCTGATACTTGAGGA TAATGATGATCCAACGGCTGTAGAACTCCAATCAACTAGTAGGTACACAA TCTAACCATAGAGTGATCAAGAAGAAAGGAGATGCCCAACAGCCGCTTCT TGATGGGCTTCTTTAAAG |
| Genomic location of T1721
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| User comments |
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