SGN Marker T1749
SGN-M2242
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 99
Tomato EST read: TRZBK20TH
Arabidopsis best BAC match: AL050351.1
Arabidopsis position: 4.1960000
Arabidopsis identities: 0.717
Best GenBank protein hit: CAB80575.1
Evalue: 2.0e-43
Identities: 0.761
Description: Inositol monophosphatase-like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
Tomato EST read: TRZBK20TH
Arabidopsis best BAC match: AL050351.1
Arabidopsis position: 4.1960000
Arabidopsis identities: 0.717
Best GenBank protein hit: CAB80575.1
Evalue: 2.0e-43
Identities: 0.761
Description: Inositol monophosphatase-like protein [Arabidopsis thaliana]
Comment:
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1749 was used as an overgo probe on plate 7 [well H11]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GTAGTAGAGTCTGGTCTTAAGCCG
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B sequence
GTGAGAGGAAGTCGTACGGCTTAA
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AB sequence
GTAGTAGAGTCTGGTCTTAAGCCGTACGAC
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Marker sequence
GATTTGTTCGAAGGGGATGCTGAGATTGCCTTTGCTCGTGTTAGAAGCAA
GGTGAAAGTTCCACTGTACGGATGTGACTGCTATGCTTATGCCCTATTGG CTTCTGGATTTGTGGATCTTGTAGTAGAGTCTGGTCTTAAGCCGTACGAC TTCCTCTCACTTGTACCAGTAATAGAAGGTGCTGGAGGAACAATAACCGA CTGGAAAGGCCAACATTTTAATTGGAAAGCTTCTGCTGGTTCACCAGCCA CAAGTTTTAATGTAGTGGCAGCCGGTGATAAAGAAGTTCACCAAGAAGCT CTGGATGCATTGCAGTGGCGGTAGAGGCTGCTATGTTTCACTGTATTGGC TCACAACTCCCTTTGGCGAATATCATAGTTATTGATTACTTTGCCGCTGA GTCTCTACATTAATTTTAACTTTTGAATCAAATTATGGTGGTCCTCTGTT GATAGTTATTT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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