SGN Marker T1758
SGN-M2250
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
COS markers are Conserved Ortholog Set - orthologs between tomato and arabidopsis
Synonyms |
Locus associations |
COS information |
MIPS Category: 6.04
Tomato EST read: TRZBK96TH
Arabidopsis best BAC match: AC021043.4
Arabidopsis position: 1.0616000
Arabidopsis identities: 0.731
Best GenBank protein hit: AAD27848.1
Evalue: 1.1e-69
Identities: 0.753
Description: peroxisomal targeting signal type 2 receptor [Arabidopsis thaliana]
Comment: compare with TRXAE23TH
More information about COS markers can be found on the COS markers page.
Tomato EST read: TRZBK96TH
Arabidopsis best BAC match: AC021043.4
Arabidopsis position: 1.0616000
Arabidopsis identities: 0.731
Best GenBank protein hit: AAD27848.1
Evalue: 1.1e-69
Identities: 0.753
Description: peroxisomal targeting signal type 2 receptor [Arabidopsis thaliana]
Comment: compare with TRXAE23TH
More information about COS markers can be found on the COS markers page.
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| ![]() Tomato-EXPEN 2000 |
Overgo hybridization and physical mapping |
T1758 was used as an overgo probe on plate 7 [well D2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
ACGGGAGAGTTCACATTCTTCAGC
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B sequence
GGTCCGTTTGGATTGAGCTGAAGA
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AB sequence
ACGGGAGAGTTCACATTCTTCAGCTCAATC
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Marker sequence
GCCTTTTACATCGGGAAAGTAAATCACCGGCAACAATCAAATCAGCGCCG
ACCGCTGTCCGCCGTCCGCCGACCGCCTAAGATGCCGGTATTTAAAACTC CATTTAACGGTTACTCCGTAAAATTCAGTCCCTTCTACGAAAACAAACTA GCTGTGGCCACTGCGCAGAATTTCGGCATCCTTGGTAACGGGAGAGTTCA CATTCTTCAGCTCAATCCAAACGGACCGGTATCGGAACTTGCGGCTTTTG ACACAGCTGATGGAGTTTACGACGTTTGCTGGTCGGAAGCTCACGATTCA CTTGTTATTGCTGGAAGTGGCGATGGTTCTGTGAAACTCTATGACCTTTC TTTGCCTCCCACCAATAACCCTATTCGTTCTTTTAAGGAACATACACGGG AAGTTCACTCTGTTGACTATAATACCGTGAGAAAAGATTCCTTCTTGTCA GCGTCTTGGGATGATACTGTGAAGCTATGGACTGTTGATAGAAATGCCAG TGTAAGGACTTTTAAGGAACATGCTTATTGTGTCTATTCCGCTGCTTGGA ATC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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