SGN Marker TG130
SGN-M226
Synonyms |
Locus associations |
RFLP details |
Insert size
1600
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
ATTCAGTTAAGCATTTTTACAAACACATAATCTGCAATTTTACATTCTCCGGTTGGATCGCCGGTTTCCGGTATGGAAACAATCGGCCGG
AACCCACTTTGTTTTTCATCTAAAATTCTTTACACACAATTATAGTTAGATAATTGATAAACAAACCCGATATATATAAATTTTATTTTT TTTGGTTGAAATGGCTGACATCAATGTTAACTCAGTGTTGACTTCGGGGGAAGATATGGCGGAGAAAGCATTGAGCAAGAGATATGAAGG GTTAGTTGCTGTCCGTACAAAAGCTATAAAAGGGAAAGGAGCTTGGTACTGGGCTCATCTGGAGCCTGTTTTGATTCAAAACCCGGAAAC GAATCATCCAAAAGCAGTGAAACTTAAGTGCACTTTGTGTGATGCTGCGTTTTCGGCTTCAAATCCGTCACGGACTGCTACAGAGCATCT AAAAAGAGGTACTTGTCCCAATTTTGGCGCTGTTTTGAGGCCCATTTCACAGTTACCCC |
Reverse sequence
TTGGGCTGAGTATTCGAGCATAACTTAGTATATCCTCCAACATTGCAATAACAGGACCATAGTTCTTAGACAGATTGCAGTCAGCTGAAG
GAACTCTAATCAACCCTGCAAGCTCAACACCGTGCGACCTGAATTTCCTAAAATGATTTCTGATTTGGGACTTGCTATTGAAAAGATTTG CAATTTTTAAGCAATTATCAGTAACGATTTTAAAAAGTGGAAGTTCTCTACCAAAGTCCTTCAACAAACTAATAAATCCATGAAGTTGGC ATGAAAGATTCACCATCCAATGATTTTGTAACTCCAAATTCCTCAATGCCTTACTTTTATACTTGTCTCCAACTATTCCCACACATCTTT GAACAACATTACCACACAACCCTTTAATAGTTTCCCGTAAAACTTCCTCTGCATACTCCGATGGCACCAATCCGCCCTTATACACTGCCT TATGAAATACATTAGTACCGTTAGGAAGATTTATGATAAATTTAATCACAGTATCTTCCCCATACTTACAAATATCCCTCCCC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U171322 | 482 (94.7% of RFLP seq) | + | |
SGN-U155739 | 474 (88.9% of RFLP seq) | - |
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| ![]() Tomato QTL map |
| ![]() Potato meta-QTL consensus map |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Pepper-COSII |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Pepper-AC99 |
| ![]() Pepper-FAO3 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Other PCR data |
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Overgo hybridization and physical mapping |
TG130 was used as an overgo probe on plate 2 [well E11]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CTTTGTGTGATGCTGCGTTTTCGG
|
B sequence
CGTGACGGATTTGAAGCCGAAAAC
|
AB sequence
CTTTGTGTGATGCTGCGTTTTCGGCTTCAA
|
Marker sequence
ATTCAGTTAAGCATTTTTACAAACACATAATCTGCAATTTTACATTCTCC
GGTTGGATCGCCGGTTTCCGGTATGGAAACAATCGGCCGGAACCCACTTT GTTTTTCATCTAAAATTCTTTACACACAATTATAGTTAGATAATTGATAA ACAAACCCGATATATATAAATTTTATTTTTTTTGGTTGAAATGGCTGACA TCAATGTTAACTCAGTGTTGACTTCGGGGGAAGATATGGCGGAGAAAGCA TTGAGCAAGAGATATGAAGGGTTAGTTGCTGTCCGTACAAAAGCTATAAA AGGGAAAGGAGCTTGGTACTGGGCTCATCTGGAGCCTGTTTTGATTCAAA ACCCGGAAACGAATCATCCAAAAGCAGTGAAACTTAAGTGCACTTTGTGT GATGCTGCGTTTTCGGCTTCAAATCCGTCACGGACTGCTACAGAGCATCT AAAAAGAGGTACTTGTCCCAATTTTGGCGCTGTTTTGAGGCCCATTTCAC AGTTACCCC |
Marker Submitted By |
Name: Molly Jahn
Organization: Cornell University
Organization: Cornell University
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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