SGN Marker TG362

SGN-M250

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
800
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
Forward sequence
TGCTATTGCACCCGTCGTTAGTGAAAGTTGATGATTTTAAAGGTATGGCTGTTATTACTAAAATCGTCTGTGATCAAATTCAGCTATTAC
TGTGCTGATTTTACACTGATCTGTTGCATTATGCACCCATTTCATTTGGTGTTCTCAGTGTCACTTGAATCCAAGATTTATACGCATTTG
ATGTGTATGCTATTTATATGTGGGCCATTGAGATCCAGATGATGGTTGGTTCTCTAGAACTTGATATGCGTGTTATGTATTCGTTTATGC
CTCAATTCCAATCCAATATTGAAACTTGCTAATAGGTTTATGAATATCCCTTGGTGTAATCGGTATTAAGTGTTGTTTGATTCTGATGAC
TACCTTGAACTGCATCACCATGGAATCTTTCCTTTTTCTCTTTAATCTTCTTATTTGTACCTTATTTTTTCCTCACCAATTGATGATACA
TATTACATGCAGAGGTTAACGCACCAATAGCTATTTTAGCTGCTGAGATAGATAAAATCTC
Reverse sequence
ATTATGTTATCAAGTTGGCTATTTAAAGCCCTATTATGCTTAATTAAATATAGAGAGACATTTTCAATCCTTCTGTGCTGCTCCATCTTT
TAAACAACACCAACAAGAGCAAACCAAAGCAAAGGGTGAATCTAAAATCTTGTAACACACATTGAGAGAAATCAAATTAGTCACCTACTT
GTATATCCATGAATAAACAAGACATTATAATTTCAAACATCAATCATTTTAGAATGACGAGAAAAACCTAATAAGCAACTGTGATGTTCA
TGTACCTCAGGTTTTGATGATAAGACCTCCTCAAACTGGATAATAAGCTCTGGAGGGGAGATTTTATCTATCTCAGCAGCTAAAATAGCT
ATTGGTGCCTTAACCTCTGCATGTAATATGTATCATCAATTGGTGAGGAAAAAATAAGGTACAAATAAGAAGATTAAAGAGAAAAAGGAA
AGATTCCATGGTGATGCAGTTCAAGGTAGTCATCAGAATCAAACAACACTTAATACCGATTACACCAAGGGATATTCATAAAACTAT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1648483.8e-0528 (5.2% of RFLP seq)-
SGN-U1463042.6e-12104 (19.4% of RFLP seq)-
SGN-U1463031.1e-17105 (19.6% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 8728)
Chromosome
10
Position
34.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG362 was used as an overgo probe on plate 15 [well E3]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

P173C14,   P288J07,   P104E01,   P030G17,   P138O11,   P052B08,   P304O24,   P288K07,   P329I16,   P205C17,   P329K13,   P189D06,   P320G07,   P025B04,   P189P03,   P043J03,   P041H01,   P159P07,   P218F17

 Overgo Sequences

A sequence
ATGTGGGCCATTGAGATCCAGATG
B sequence
CTAGAGAACCAACCATCATCTGGA
AB sequence
ATGTGGGCCATTGAGATCCAGATGATGGTT
Marker sequence
TGCTATTGCACCCGTCGTTAGTGAAAGTTGATGATTTTAAAGGTATGGCT
GTTATTACTAAAATCGTCTGTGATCAAATTCAGCTATTACTGTGCTGATT
TTACACTGATCTGTTGCATTATGCACCCATTTCATTTGGTGTTCTCAGTG
TCACTTGAATCCAAGATTTATACGCATTTGATGTGTATGCTATTTATATG
TGGGCCATTGAGATCCAGATGATGGTTGGTTCTCTAGAACTTGATATGCG
TGTTATGTATTCGTTTATGCCTCAATTCCAATCCAATATTGAAACTTGCT
AATAGGTTTATGAATATCCCTTGGTGTAATCGGTATTAAGTGTTGTTTGA
TTCTGATGACTACCTTGAACTGCATCACCATGGAATCTTTCCTTTTTCTC
TTTAATCTTCTTATTTGTACCTTATTTTTTCCTCACCAATTGATGATACA
TATTACATGCAGAGGTTAACGCACCAATAGCTATTTTAGCTGCTGAGATA
GATAAAATCTC
Genomic location of TG362  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D250 marker 250
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