SGN Marker TG443
SGN-M270
Synonyms |
Locus associations |
RFLP details |
Insert size
1700
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG443 image not available
|
Forward sequence
AACTTTCTCGGCAGATGCATGTGTGAAGAACTCCACAAAACCATACCCTTCAGAGAAACCAGTCTGTTTATTGCGAATTACCTTGATGGA
GGCAACCTGCACAAACAAGAACCATATAAGCTGACAAGAAAATTATGAGGTCAAAGACTTCACTTTTTCCCCATATGGAGAAATCATTTT TGGGTGGGCAATGGGTCAATATTTAACCTCCAAGCACATTCAAGAATTTCAAATGGCCTGAATCATCATGCAAGAGTTTCTCATTCTGCT TCCAACTTAATAAATGTTGAATAGCTACCAGGAGTTTATATGATGTCACTAATTACTTAGTATTTTCTTGTCATTCAATATGAATACTAG AGAGCCTCAATGTTCACCAACTTGGGTGTGTCATGACATATCATGCTCATTGGCATGGGCAGACATATCATGTTCATTGACATATGCAAT ACAATTCATGTGTGTTGTGCTGTTAGTACAGAGTAATGTTGTGTGCCA |
Reverse sequence
GGAGACAGCTTGCATGCCTGCAGCGGTTGTACCCGTGGCGGCGGCGGCGCCAGCAGGGGCGCAGCAGCAGCCGTGGGTGGCGATGCAGTA
CCCGGCGGCGGCGATGGTAATGCAGCATCCAATGATGCCGGCCCCACATTATCCACCGCACTATATGCCGTTTCATCCACAACACCATCA CCACCTTATCCACCACCCACCGCACTCACCGTCACCGCATCAACAAGGTGGAGGTGGAGGATCTAATAATAATGAGAATCGAACGATCTG GGTGGGTGACCTTCATAATTGGATGGATGAGGATTATCTACGTAGCTGCTTCGCTACCACTAATGAGGTATAAGTCTGTACCAGTTTACG CTCATGCATATATTTATATATATTTGGTGCTCTGTTTTTTTAAACACGTGATTTATGTTTTTCTATAAATGTTTTCATGTGATTAATTAC AGTAAAATCTGGATTTATTGAATGGGGTAGAATGATGGCAGGTAGCTACTAGTTAGCCGCCGTCACAAGTAAAGTTTTTATATT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U145179 | 2.4e-49 | 98 (19.7% of RFLP seq) | + |
SGN-U161404 | 1.2e-60 | 117 (21.9% of RFLP seq) | - |
SGN-U145179 | 322 (60.3% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG443 was used as an overgo probe on plate 7 [well C4]
Plausible BAC Matches: None
Overgo Sequences
A sequence
TAGAGAGCCTCAATGTTCACCAAC
|
B sequence
GTCATGACACACCCAAGTTGGTGA
|
AB sequence
TAGAGAGCCTCAATGTTCACCAACTTGGGT
|
Marker sequence
AACTTTCTCGGCAGATGCATGTGTGAAGAACTCCACAAAACCATACCCTT
CAGAGAAACCAGTCTGTTTATTGCGAATTACCTTGATGGAGGCAACCTGC ACAAACAAGAACCATATAAGCTGACAAGAAAATTATGAGGTCAAAGACTT CACTTTTTCCCCATATGGAGAAATCATTTTTGGGTGGGCAATGGGTCAAT ATTTAACCTCCAAGCACATTCAAGAATTTCAAATGGCCTGAATCATCATG CAAGAGTTTCTCATTCTGCTTCCAACTTAATAAATGTTGAATAGCTACCA GGAGTTTATATGATGTCACTAATTACTTAGTATTTTCTTGTCATTCAATA TGAATACTAGAGAGCCTCAATGTTCACCAACTTGGGTGTGTCATGACATA TCATGCTCATTGGCATGGGCAGACATATCATGTTCATTGACATATGCAAT ACAATTCATGTGTGTTGTGCTGTTAGTACAGAGTAATGTTGTGTGCCA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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