SGN Marker TG475
SGN-M338
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
900
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
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Forward sequence
TCGCTCTACTCCCCCAATTTGAACTCTCTATCGGTGATCTCTTTCTCCGGCGAAGTATTTCGGTAAGTTTCTTATCTCATCTCTTATGTT
TTCTTCTTCCGTTCATTTCACATTTGAAAAACCCTAACCCCTTTTTTGATTGCGAGTTCAAAGCACCAACTTCGATGTAGGTTTTACAAT GTTTTTTTTTTTTTTGAATTCTTCATGTTCATTGTGTTGTGATATTGGATATTAAGTTTAATCATAAGGTGAGGTGCCGGAGTCTTCGTA GTTTGTTTAAGAGATCTGTATTAGAGTAATCTTAGCGACTGTAAATAAAGTGGGTATATTGGGAAATTCATAGGGAAATTGGATTCGTTC AGGATTGAGGTGTTATTGTTGTTGTTCACTGTAATAATAAGGGAAAAAAAGTGAAAGGGGTGTAAAAGATGGAAACTTTATCACTTTCCA GGAATTGTGGTGTAAAGTTTAGTTAATGGGGTTCAATTTGAA |
|
Reverse sequence
GGGAGACAAGCTTGCATGCCTGCAGAAATTGAAGCTCCAATATGCAGCACAAACCAACACATTTCACAAAGAACTGTAAAACCCAACTGC
TGAAAAGTAACAATTTGATAACAAAAACATTGAATGATGATGAAAATTCCATCTTTTACACCAATTCCACTTTTTCCCTTCGTTATATAA GAGTATAACAACAATAACTCCTCAATCCTAAACTAATTGAATTGCCCTTACAAATTTTTAACCTGAGTTTTAGCTCCATCACACGTAACA GACCTAATGTAAGCCACAAGTATACCTCTAGACTCCAAGCATCAAGTAAAAATTAAAGCCCAAGCGCTTAAAAGTCGCAAATGATCATAT AGACAATTGACTTAGGCAGACATCATATTTACAAGCTCATAAGATTCTTCAAATTGAACCCCATTAACTAAACTTTACACCACAATTCCT GGAAAGTGATAAAGTTTCCATCTTTTACACCCCTTTCACTTTTTTTCCCTTATCATTACAGTGAACAACAACA |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U161437 | 6.3e-16 | 46 (9.3% of RFLP seq) | + |
| SGN-U145253 | 1.8e-28 | 63 (12.8% of RFLP seq) | + |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG475 was used as an overgo probe on plate 14 [well H1]
Plausible BAC Matches: None
Overgo Sequences
|
A sequence
TCTCTATCGGTGATCTCTTTCTCC
|
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B sequence
ACCGAAATACTTCGCCGGAGAAAG
|
|
AB sequence
TCTCTATCGGTGATCTCTTTCTCCGGCGAA
|
|
Marker sequence
TCGCTCTACTCCCCCAATTTGAACTCTCTATCGGTGATCTCTTTCTCCGG
CGAAGTATTTCGGTAAGTTTCTTATCTCATCTCTTATGTTTTCTTCTTCC GTTCATTTCACATTTGAAAAACCCTAACCCCTTTTTTGATTGCGAGTTCA AAGCACCAACTTCGATGTAGGTTTTACAATGTTTTTTTTTTTTTTGAATT CTTCATGTTCATTGTGTTGTGATATTGGATATTAAGTTTAATCATAAGGT GAGGTGCCGGAGTCTTCGTAGTTTGTTTAAGAGATCTGTATTAGAGTAAT CTTAGCGACTGTAAATAAAGTGGGTATATTGGGAAATTCATAGGGAAATT GGATTCGTTCAGGATTGAGGTGTTATTGTTGTTGTTCACTGTAATAATAA GGGAAAAAAAGTGAAAGGGGTGTAAAAGATGGAAACTTTATCACTTTCCA GGAATTGTGGTGTAAAGTTTAGTTAATGGGGTTCAATTTGAA |
| Related Markers
|
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of TG475
|
| User comments |
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