SGN Marker TG112
SGN-M345
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
350
|
Vector
pUC
|
Cutting Site
SRD/PST1
|
Drug Resistance
AMP
|
Image
TG112 image not available
|
|
Forward sequence
ATCGTCGACCTGCAGGGGGGGGGGGCTGAATCAAGAAAAATTCAAGGAAATTTAAGACTCAAGTTGAGTTCAAAGAGTTTTTCAAAAGTC
TTTCCCGAACGTTTTAACTTTGTTTAAGACTTGAGTTCTGAGTTATGAAAAAATTAAAGAGTCGAGTTCATTTCTTCAAAATTTATACGG AACTAAGTATTCCCAAGAGTTAAATGTTGTCACATTTAGACAAGAGAGGAAACACAGATTTTCAAGAGAGCTTTTAAGCTAAGTTTTGAG TAATTATCTCAAATCAAAGAAAGATTTTTTTACAAACATATGAGCTCAGTCCCCCCCCCCCTGCAGC |
|
Reverse sequence
GGGGGGGGGGGACTGAGCCATATGTTTGTAAAAAATCTTTCTTTGATTTGAGATAATTACTCAAAACTTAGCTTAAAAGCTCTCTTGAAA
ATCTGTGTTTCCTCTCTTGTCTAAATGTGACAACATTTAACTCTTGGGAATACTTAGTTCCGTATAAATTTTGAAGAAATGAACTCGACT CTTTAATTTTTTCATAACTCAGAACTCAAGTCTTAAACAAAGTTAAAACGTTCGGGAAAGACTTTTGAAAAACTCTTTGAACTCAACTTG AGTCTTAAATTTCCTTGAATTTAATTTTGGATTCAACCCCCCCCCCCTGCAGGTCGACGGATCCCCGG |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U165490 | 3.9e-10 | 52 (15.4% of RFLP seq) | + |
| SGN-U165490 | 3.9e-10 | 52 (15.4% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG112 was used as an overgo probe on plate 6 [well E2]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
|
A sequence
TTCCCAAGAGTTAAATGTTGTCAC
|
|
B sequence
CCTCTCTTGTCTAAATGTGACAAC
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AB sequence
TTCCCAAGAGTTAAATGTTGTCACATTTAG
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|
Marker sequence
ATCGTCGACCTGCAGGGGGGGGGGGCTGAATCAAGAAAAATTCAAGGAAA
TTTAAGACTCAAGTTGAGTTCAAAGAGTTTTTCAAAAGTCTTTCCCGAAC GTTTTAACTTTGTTTAAGACTTGAGTTCTGAGTTATGAAAAAATTAAAGA GTCGAGTTCATTTCTTCAAAATTTATACGGAACTAAGTATTCCCAAGAGT TAAATGTTGTCACATTTAGACAAGAGAGGAAACACAGATTTTCAAGAGAG CTTTTAAGCTAAGTTTTGAGTAATTATCTCAAATCAAAGAAAGATTTTTT TACAAACATATGAGCTCAGTCCCCCCCCCCCTGCAGC |
| Genomic location of TG112
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| User comments |
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