SGN Marker TG486

SGN-M360

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1600
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG486 image not available
Forward sequence
ATATATAAAATAAATCTAAAGAAAATTTGTTTTCATGCTCAATTGGTACACAAGTCCAATTCATTACCATCTACCTTTATGTCAGAAGAG
AAGTTTGTCACAATTTTGTTGTATCCAGCTTTCTTCAGTTGAAAATTCATCCATCTAAGCAAGATCTTTTCTGGAGGAAGGTTCATCAAC
TCTTCTACATCCTGAGATCATAAAAGTGAGCTGAAGCACATAACACAAGCTTTTTGGAAGATAGTCACATGAACAAATCATTTTACGAGA
TAATGTCCACTATACCTTGCTATCATCAACTAACTCCACCAATTGAGGTGTTTTCTTTAGATTGAGGTCTGCCAATAGTTGAATCTGAAA
TCGCGTGATTAAAAAATCAATCTCCTTGGGAAATATAAGACTACAGTTTTGTGTCTTAATATATAAAATATATGGTGATACCATTTTGTA
ACTTAATGCCGGCTGCTATTGGTAAGGTAATCTAGTCCTATAAAAAGTTGCT
Reverse sequence
GGAGACAAGCTTGCATGCCTGCAGCAAGAATGGGAAATAATGTCAAGAACTCATCAGCTTTCCTAAAGTCTCCAACTTCTACATTACTTC
ATACAATTAGTGAATCTGAGAAGGCATCATATGTTGCCCATATTAACAACTATCTGGTGAGAGATGAATTTTTGAAAAAATTCCTTCCTA
TTGATCCTTCTACAAATGATCTCTTTGAGATTTCCAAGGATGGAGTTCTTATATGGTCAGCATCAGTCTCGCTTCTTGTACACATGTCTC
AAGAGCTTGTAAATCCGTAGTCTGATTGTCAATTAAATTGCCCTTTGTTGCAGTAAGCTTATCAATGTGGCTGTGCCTGGAACAATTGAT
GAACGAGCAATAAATATGAAGAGAATGCTTAATCCATGGGAAAGGAATGAAAATCATACTTTGTGCCTAAACTCTGCAAAGGCTATTGGA
TGTACTGTGGTCAATATTGGGACACAAGACTTTATTGAAGGAAGGGTATGTGTCTCCTTATGAATTTCTGCTCATATATTTTGAC
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1493941e-1472 (14.3% of RFLP seq)+
SGN-U1493941.8e-2594 (18.7% of RFLP seq)+
SGN-U1719328e-3472 (14.3% of RFLP seq)+
SGN-U1719321.8e-62120 (23.9% of RFLP seq)+
SGN-U1595852.6e-12148 (27.7% of RFLP seq)-
SGN-U1493943.8e-42214 (40.0% of RFLP seq)-
SGN-U1719321.1e-54107 (20.0% of RFLP seq)-
SGN-U1493944.6e-57171 (32.0% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 8974)
Chromosome
9
Position
54.40 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG486 was used as an overgo probe on plate 15 [well E8]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
TCTGGAGGAAGGTTCATCAACTCT
B sequence
GATCTCAGGATGTAGAAGAGTTGA
AB sequence
TCTGGAGGAAGGTTCATCAACTCTTCTACA
Marker sequence
ATATATAAAATAAATCTAAAGAAAATTTGTTTTCATGCTCAATTGGTACA
CAAGTCCAATTCATTACCATCTACCTTTATGTCAGAAGAGAAGTTTGTCA
CAATTTTGTTGTATCCAGCTTTCTTCAGTTGAAAATTCATCCATCTAAGC
AAGATCTTTTCTGGAGGAAGGTTCATCAACTCTTCTACATCCTGAGATCA
TAAAAGTGAGCTGAAGCACATAACACAAGCTTTTTGGAAGATAGTCACAT
GAACAAATCATTTTACGAGATAATGTCCACTATACCTTGCTATCATCAAC
TAACTCCACCAATTGAGGTGTTTTCTTTAGATTGAGGTCTGCCAATAGTT
GAATCTGAAATCGCGTGATTAAAAAATCAATCTCCTTGGGAAATATAAGA
CTACAGTTTTGTGTCTTAATATATAAAATATATGGTGATACCATTTTGTA
ACTTAATGCCGGCTGCTATTGGTAAGGTAATCTAGTCCTATAAAAAGTTG
CT
Genomic location of TG486  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D360 marker 360
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