SGN Marker TG127
SGN-M369
Synonyms |
Locus associations |
RFLP details |
Insert size
2800
|
Vector
pUC
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG127 image not available
|
Forward sequence
TACCTTTTTGAGGATTCTCTANCCGACCCTACTTNCTTGGGATTGAAGCGTAGCTGTTGTCTATATACATTAGTATTTACTTTAACATGT
TGTAAAACACAAGGTGATTTTTTCCATCTGTCTTAGCCTTGGTGGACAGAGTTACTTGGTACTTGTTATTGATGGGAAGTGGCAGGTATC CCGTGGAATTAGTCGAGGTGAGCAAAAGCTAGCCCGGACACCACGATCATCAAAATAAAAAAAGTTTGTTACCTATAGCTATCTTTTAGG TGACCTGATTGTGTATTATGTATGACAAGTCTTACTTAGTTGGCGTTTGAACACCGTTTTCTGCTTCTATAAAGCTTGAGATACTGGTTA ATTTAGTTCAAGAAGGTTTTAGACTTGTATTCGTTTTGTTTAGACTTGTTGAATAAATGTTACTCGAAAAGTTATAGGCTAA |
Reverse sequence
CAACGACGATGATAATACTTAGATACCTCTAGCTAGTAAAATGTAGCACATGATCAAAACCTGAGAAGATTGAATAGTTTGTTTCAGTTT
TAGTCGAAAGATACGTACTTGATTCCCACAATAACCTTGAAATCATCTTCCAAGGATCTTTTTATGTACTTCTGAAAATTAAACTTACTT CCAGGTGCTAAATGGACCTGCAACAAGAGGAAAACAATAAACAAAAAGAAGTAAATATCTTTTTCTGTCCTACAAGAGACATAATTTGAT TTGAAGCCTTCAATTTGTGAACCTCACCGAGATGAAACCGTGGCGCATGGTCAAGTAGTCAGCTTTCCTAACTGACCTGAAAAATTGCCT AAAAAAGCACACCTGGATATTTTGGGGAACTAGTTAGAAAAGAAGAAACAAAAATGGTTGTAATACAACATTTCACTTGTTACATTC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U169485 | 5e-07 | 55 (12.4% of RFLP seq) | + |
SGN-U154693 | 7.4e-37 | 89 (19.9% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG127 was used as an overgo probe on plate 13 [well E6]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
A sequence
ATTGATGGGAAGTGGCAGGTATCC
|
B sequence
CTCGACTAATTCCACGGGATACCT
|
AB sequence
ATTGATGGGAAGTGGCAGGTATCCCGTGGA
|
Marker sequence
TACCTTTTTGAGGATTCTCTANCCGACCCTACTTNCTTGGGATTGAAGCG
TAGCTGTTGTCTATATACATTAGTATTTACTTTAACATGTTGTAAAACAC AAGGTGATTTTTTCCATCTGTCTTAGCCTTGGTGGACAGAGTTACTTGGT ACTTGTTATTGATGGGAAGTGGCAGGTATCCCGTGGAATTAGTCGAGGTG AGCAAAAGCTAGCCCGGACACCACGATCATCAAAATAAAAAAAGTTTGTT ACCTATAGCTATCTTTTAGGTGACCTGATTGTGTATTATGTATGACAAGT CTTACTTAGTTGGCGTTTGAACACCGTTTTCTGCTTCTATAAAGCTTGAG ATACTGGTTAATTTAGTTCAAGAAGGTTTTAGACTTGTATTCGTTTTGTT TAGACTTGTTGAATAAATGTTACTCGAAAAGTTATAGGCTAA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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