SGN Marker TG493

SGN-M379

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1800
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG493 image not available
Forward sequence
CTGCGCAGAAGACGAAAGTCCACCGCCGGCGACCTGAGACGGTGGAGGAGTAGTCACCCCAGGGTTTGGTCTTCCGCGTTTCCGCGATTC
AGTTGTACTGACGGAAGGGTCCGGAAATGAAGGGACCAGAGGAGTCGAGGAGGAGATTGGTTGCGCCGGCGTATTATCGTCGGCGGCGGA
GGTTGATCCCACGTTTTCCATTGATGCTTTGAACTGATTTTTTTCGCTCTATTTTCACTACTCCATCGGTAGTACTGTGCTCTATTTATA
GTTTTCAGAAAACAAAAACCGCTTCATTCAGAATCAAAACAGATTTGGAAATGAATTAATTTAAATCCCATTTTTGAAAAAAACAAAATT
GGTCAAAATTGTGTTAAAAACGTAAAGAATAAAAAATCATTTTGTTTTACTCCTAACGATTTTCTGTGCTATTTAGGTAAAAATGTGATC
ATT
Reverse sequence
GGGAGACAAGCTTGCATGCCTGCAGACATTCCATGTACAAGATAATGCTTGTTAGGTAACACACGTTGTTTCTTTTTCTCATATTTTCTG
CTCTTGGTTTCTTATGCAGACGTGGGTGAGAATGATTCAAGTCATTCAATGGATGAGGATCAAGCAAAAAAATCACCTGCACAGAAACGT
AAAAGGCTCCGAAGGAGTTGTAGGAAAAGTTAGTATTACATTGAAACATGCCGTTTCTTCTTGTGCAGGTATCTTTATCGTATGTATTTG
TTGTCGATATGCAGCGGCTTTTTGTTAGTACAGTCATATGTTGGGAAGAGGTCATAGTGAAATATGTTATTTTGTTGTACACCTTATATC
AGAGAGATGTGCTATGACCGAACACTTGTCTTGAGTTATAAGTTTCAACTAGTACAAGTAAATCAAAGACACATAGATTGATACTTATTT
GATCACAAATCAAATATGCATAACTGCTAGTAGCTTTTTCTTTTCCCGTT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1589032e-0650 (11.0% of RFLP seq)+
SGN-U1589031.3e-0732 (7.1% of RFLP seq)+
SGN-U1556399e-1564 (14.1% of RFLP seq)+
SGN-U1556399e-1556 (12.4% of RFLP seq)+
SGN-U1589031.6e-2293 (20.5% of RFLP seq)+
SGN-U1641534.2e-2070 (14.0% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9016)
Chromosome
2
Position
68.00 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
TG493 was used as an overgo probe on plate 15 [well G12]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
TTCCGCGATTCAGTTGTACTGACG
B sequence
CATTTCCGGACCCTTCCGTCAGTA
AB sequence
TTCCGCGATTCAGTTGTACTGACGGAAGGG
Marker sequence
CTGCGCAGAAGACGAAAGTCCACCGCCGGCGACCTGAGACGGTGGAGGAG
TAGTCACCCCAGGGTTTGGTCTTCCGCGTTTCCGCGATTCAGTTGTACTG
ACGGAAGGGTCCGGAAATGAAGGGACCAGAGGAGTCGAGGAGGAGATTGG
TTGCGCCGGCGTATTATCGTCGGCGGCGGAGGTTGATCCCACGTTTTCCA
TTGATGCTTTGAACTGATTTTTTTCGCTCTATTTTCACTACTCCATCGGT
AGTACTGTGCTCTATTTATAGTTTTCAGAAAACAAAAACCGCTTCATTCA
GAATCAAAACAGATTTGGAAATGAATTAATTTAAATCCCATTTTTGAAAA
AAACAAAATTGGTCAAAATTGTGTTAAAAACGTAAAGAATAAAAAATCAT
TTTGTTTTACTCCTAACGATTTTCTGTGCTATTTAGGTAAAAATGTGATC
ATT
Genomic location of TG493  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D379 marker 379
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