SGN Marker CT58

SGN-M423

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
600
Vector
pBLUESC
Cutting Site
EcoR1
Drug Resistance
AMP
Image
CT58 image not available
Forward sequence
TTTTTTTTTTTTTTTTTTTTGATGATGATTCCAGACCAGAGAAAAAACTGAAGTCCTGTTCCAGCACTTCATTGACAGTTGACGGTAACA
CTGTGAACACGCTATCTGAAGAGCTATCGGCTTTTGAATCCCAGATGAAGTTCTTGCAGATCCCATATCTCGAGGGAAATTGGGATGCAT
CGGTTGATGCCTTCCTCAATACAAGTGCAATTCAGGATGGTGGAAACGCCATGGACCTTTGGTCCTTCGATGATGTACCTTCTTTAATGG
GAGGTGCCTACTAAGCTGCATACACATCTTCCCTTGCTAAGTTTTGTAAATAACGCTTCATTTGAGTGAAGTTTGCGCCTGCGTTTACGT
TTATCACCAAACTAAAAGACTATATATGTGTTGTATTAATTTATTCAAAATTTACTCGTTTGATATATGTAAGCATGTATCCTTGTTTTC
ATAAGTCAATGTCTTATTTTCTTAAAAAAAAAAAAAAAAAAA
Reverse sequence
TTTTTTTTTTTTTTTTTTTTGATGATGATTCCAGACCAGAGAAAAAACTGAAGTCCTGTTCCAGCACTTCATTGACAGTTGACGGTAACA
CTGTGAACACGCTATCTGAAGAGCTATCGGCTTTTGAATCCCAGATGAAGTTCTTGCAGATCCCATATCTCGAGGGAAATTGGGATGCAT
CGGTTGATGCCTTCCTCAATACAAGTGCAATTCAGGATGGTGGAAACGCCATGGACCTTTGGTCCTTCGATGATGTACCTTCTTTAATGG
GAGGTGCCTACTAAGCTGCATACACATCTTCCCTTGCTAAGTTTTGTAAATAACGCTTCATTTGAGTGAAGTTTGCGCCTGCGTTTACGT
TTATCACCAAACTAAAAGACTATATATGGGTTGTATTAATTTATTCAAAATTTACTCGTTTGATATATGTAAGTATGTATCCTTGTTTTC
ATAAGTCAATGTCTTATTTTCTTAAAAAAAAAAAAAAAAAAA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1535493.5e-0544 (8.9% of RFLP seq)+
SGN-U1451697e-25159 (32.3% of RFLP seq)+
SGN-U1451684.5e-26173 (35.2% of RFLP seq)+
SGN-U1441191e-158281 (57.1% of RFLP seq)+
SGN-U144120434 (88.2% of RFLP seq)+
SGN-U1535493.5e-0544 (8.9% of RFLP seq)-
SGN-U1451697e-25159 (32.3% of RFLP seq)-
SGN-U1451684.5e-26173 (35.2% of RFLP seq)-
SGN-U1441191e-158281 (57.1% of RFLP seq)-
SGN-U144120434 (88.2% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9134)
Chromosome
6
Position
37.90 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
CT58 was used as an overgo probe on plate 2 [well G9]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

 Overgo Sequences

A sequence
CGGTAACACTGTGAACACGCTATC
B sequence
AGCCGATAGCTCTTCAGATAGCGT
AB sequence
CGGTAACACTGTGAACACGCTATCTGAAGA
Marker sequence
TTTTTTTTTTTTTTTTTTTTGATGATGATTCCAGACCAGAGAAAAAACTG
AAGTCCTGTTCCAGCACTTCATTGACAGTTGACGGTAACACTGTGAACAC
GCTATCTGAAGAGCTATCGGCTTTTGAATCCCAGATGAAGTTCTTGCAGA
TCCCATATCTCGAGGGAAATTGGGATGCATCGGTTGATGCCTTCCTCAAT
ACAAGTGCAATTCAGGATGGTGGAAACGCCATGGACCTTTGGTCCTTCGA
TGATGTACCTTCTTTAATGGGAGGTGCCTACTAAGCTGCATACACATCTT
CCCTTGCTAAGTTTTGTAAATAACGCTTCATTTGAGTGAAGTTTGCGCCT
GCGTTTACGTTTATCACCAAACTAAAAGACTATATATGTGTTGTATTAAT
TTATTCAAAATTTACTCGTTTGATATATGTAAGCATGTATCCTTGTTTTC
ATAAGTCAATGTCTTATTTTCTTAAAAAAAAAAAAAAAAAAA
Genomic location of CT58  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D423 marker 423
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)