SGN Marker CT92
SGN-M43
Synonyms |
Locus associations |
RFLP details |
Insert size
1600
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT92 image not available
|
Forward sequence
TGTTTTTTTTTGTTGCACAAAGCCTGAGTTAAACATATTAACAGTGATACAATGCATAGCACAGAAATGAAAACCACAAATGCAAATGAC
ACTAACAAGTTCAGACTTAGAAGTG |
Reverse sequence
GTAAAAAAACAAAATTGTAATTTAGTAAGATATGTGTAGTTTGATTGTAGTGTTATTTAGTTGTAATATTGCCCTCTTACTATCTGTTGT
TTGTTACTACCTATTGTCTTTTGTACTTTTATTGTGTCTATTTCTAGTTTGTTTATGTCTTGAGCGAGGGTCTACTGGAAACAACATCTT GGCTGAGGTAGATTAAGGTATGGTACACTCTACTCTCCCCCGAACTTCAATCTGTGGGAACACTTGGTATGTTGTTGTTATTTAGTAAGA TAGACTGCAAATGAGTGAGTTTTTGGGAGGAAATGCAATGCAAGTCTTAACCACTATGAAGTTAATGATTCCCTTATCACTTGTTGCTTG AATTGATGGGTGCCGTAATACATTTTATCAGGTCCTGGTATAGCAACTTGTCAAGGTGTCCACAAAAAGCTTTAAGGAAGTTA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U156203 | 7.8e-49 | 104 (90.4% of RFLP seq) | + |
SGN-U147076 | 5e-155 | 275 (62.1% of RFLP seq) | - |
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| ![]() Tomato-EXPIMP 2009 |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT92 was used as an overgo probe on plate 12 [well D5]
Plausible BAC Matches: P074N03, P160L02, P047M08, P204B06, P276D04, P074E04, P225C20, P034C21, P204C15, P146G15, P047G10, P285O06, P198J02, P117N09, P031D09, P172C19, P263C22
Overgo Sequences
A sequence
GCATAGCACAGAAATGAAAACCAC
|
B sequence
AGTGTCATTTGCATTTGTGGTTTT
|
AB sequence
GCATAGCACAGAAATGAAAACCACAAATGC
|
Marker sequence
TGTTTTTTTTTGTTGCACAAAGCCTGAGTTAAACATATTAACAGTGATAC
AATGCATAGCACAGAAATGAAAACCACAAATGCAAATGACACTAACAAGT TCAGACTTAGAAGTG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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