SGN Marker CT69

SGN-M453

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1000
Vector
pBLUESC
Cutting Site
EcoR1
Drug Resistance
AMP
Image
CT69 image not available
Forward sequence
CTTTTTTTTTTTTTTCAAGCGAAAAAACCAAACTTTGTAATACTTTGATTTATAGATCTAAAGTTACAGTACAAAATTGAAACAAAACTG
CTCGAATGTCATTATTGGAAACCAAACTTTTTTAACTATACTCATCAGCAGTGGGGGATCAGCCAAAGCACAAAGCATCTTCTAGTTCTT
TCTCATCATCACAGTTATATCCCAGCAAATAAGCTCGAGCAAAACGACCCAATCCCATGAATGGCTCTGCTTCATCTGTAGGGCCAACTT
GTTGCTGCTCCCCATCTATTTCCATTTCGGAAGGAGACAACATCCTATCTAAACAATGGCCTGAAATGGTACACACCCTAAGACCATTTA
TAGGATCGGATACAACTTCCTTGCATGTGTCATCACAAACATGGACGTATCCAGTTTTCTCACAAACATATACATCTCCTATTTGATAGT
AAGTGAACGTCTCCCCAGACCACACATGATCGATCACCACTTTATCACCCACACCTTTGCTTTT
Reverse sequence
TCAGCAAAGTCCCTCCAGAATTGCTCCGTCACATCCTCAAGTTCCTCTCACCAGAGGATCTTGTGGCATGTACAATGGTCTGCAAGTTTT
TAAACTTTGCTGCTTCTGATGAATCCTTGTGGCGCTGGCTGTATCGGATGCGATGGGGTCTGTTGCTCCCAACTAGAAAGCCACGTGACT
GTGCTTGGAAGAAGCTTTACATCCAGCGTGATGCAGATGATATGATGGAGTTTGTCAGGAATACTCCTACAGAATTTAAGGAGTATTACA
TCCAAATGCAGGCAGCAAAAAGAAGCCAAGCTCCTCCTCCGTCTCAGGTAAATGATGACCGAATAATTCTTGATAAGACAGTTGCTGATC
AAGTCTCTACTTGGAAGAAAAGCAAAGGTCTGGGTGATAAAGTGGTGATTGATCATGTGTGCTCTGGGGAGACGTGCACTTACTATCAAA
TAGGAGATGTATATGTTTGTGAGAAAACTGGATATGCCCATGTTTGTGATGACACA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U155416499 (97.1% of RFLP seq)+
SGN-U1523901.5e-81156 (30.8% of RFLP seq)-
SGN-U1554168e-105195 (38.5% of RFLP seq)-
Mapped locations  
Map: Tomato QTL map   
Map version
137 (location: 53750)
Chromosome
8
Position
33.50 cM
Confidence
uncalculated
Protocol
RFLP

Carotene_content_car8_12_Methylthio_ethanol_content_meo8_1Hex_3_en_1_ol_content_x3o8_1 2_Phenylethanal_content_pea8_1 3_Methylthio_propanal_content_mta8_1
Tomato QTL map

Map: Tomato-EXPIMP 2009   
Map version
126 (location: 53476)
Chromosome
8
Position
42.34 cM
Confidence
uncalculated
Protocol
RFLP


Tomato-EXPIMP 2009

Map: Potato meta-QTL consensus map   
Map version
107 (location: 51903)
Chromosome
8
Position
85.10 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_8 MQTL_1_Maturity_8 MQTL_2_Late_blight_8
Potato meta-QTL consensus map

Map: Tomato-EXPEN 2000   
Map version
52 (location: 39066)
Chromosome
8
Position
40.00 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9204)
Chromosome
8
Position
41.10 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
CT69 was used as an overgo probe on plate 12 [well A9]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
CAATCCCATGAATGGCTCTGCTTC
B sequence
AGTTGGCCCTACAGATGAAGCAGA
AB sequence
CAATCCCATGAATGGCTCTGCTTCATCTGT
Marker sequence
CTTTTTTTTTTTTTTCAAGCGAAAAAACCAAACTTTGTAATACTTTGATT
TATAGATCTAAAGTTACAGTACAAAATTGAAACAAAACTGCTCGAATGTC
ATTATTGGAAACCAAACTTTTTTAACTATACTCATCAGCAGTGGGGGATC
AGCCAAAGCACAAAGCATCTTCTAGTTCTTTCTCATCATCACAGTTATAT
CCCAGCAAATAAGCTCGAGCAAAACGACCCAATCCCATGAATGGCTCTGC
TTCATCTGTAGGGCCAACTTGTTGCTGCTCCCCATCTATTTCCATTTCGG
AAGGAGACAACATCCTATCTAAACAATGGCCTGAAATGGTACACACCCTA
AGACCATTTATAGGATCGGATACAACTTCCTTGCATGTGTCATCACAAAC
ATGGACGTATCCAGTTTTCTCACAAACATATACATCTCCTATTTGATAGT
AAGTGAACGTCTCCCCAGACCACACATGATCGATCACCACTTTATCACCC
ACACCTTTGCTTTT
Genomic location of CT69  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D453 marker 453
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