SGN Marker CT76

SGN-M480

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
700
Vector
pBLUESC
Cutting Site
EcoR1
Drug Resistance
AMP
Image
CT76 image not available
Forward sequence
CTTTTTTTTTTTAGGAGAAATAAAGAAAAAGCTTTTGATTATTAAGGTTAAAATAAATAGAAGATTATGTACATATGATGATGGAATTGT
AGCAGTCACATTCATTCCTAAAAAGCTCAAATCTCTATCAAACCTAATCCACCAGCTCTTGCGAGCACAGAGACCAGACAATACCGAACC
AGGCCAGAATACTTTCACCCATCATAGTACCCTAACTTTACCGGAAAATTTGCAGCAGAACAGATAGCAGATTTTGAACGCTTTTCTGAT
ATCTTGTTGTTCCCCATCACAAACTTAGAACATAGTACGACGTCAGTAGAGGAAAATGATCGGCTCATGCTTAGCATAAAGAAGATAACC
AAATGCAGCACAAAAATGATGCCTCAAATAAAGGATCCCCTCTCTGCCAACCCAGCTATATCAGTGTACCATTATGTACTTCGAATTGTG
TCCACTCGATCAATGACATCCAAAGCTTTGAGTCGATCCATGTTAAAAT
Reverse sequence
GCTACTGCAAGAACTAGGCTTAGCAAGTTCCACAGGCTGAGTAAGAGTAGTAACCATTCCCCTATACGTGAAACCAGGAAGGATCCCTTT
CCCGTCAGGAGACTGTCTTCTGTTCCAGTAATCGATTTTAACATGGATCGACTCAAAGCTTTGGATGTCATTGATCGAGTGGACACAATT
CGAAGTACATAATGGTACACTGATATAGCTGGGTTGGCAGAGAGGGGATCCTTTATTTGAGGCATCATTTTTCTGCTGCATTTGGTTATC
TTCTTTATGCTAAGCATGAGCCGATCATTTTCCTCTACTGACGTCGTACTATGTTCTAAGTTTGTGATGGGGAACAACAAGATATCAGAA
AAGCGTTCAAAATCTGCTATCTGTTCTGCTGCAAATTTTCCGGTAAAGTTAGGGTACTATGATGGGTGAAAGTATTCTGGCCTGGTTTGG
TATTGTCTGGTCTCTGTGCTTGCAAGAGCTGGTGGATTAGGTTTGATAGAGATTTGAGCTTTTTAGGAATGAATG
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U171154352 (70.5% of RFLP seq)+
SGN-U171154476 (90.7% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9258)
Chromosome
6
Position
37.90 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
CT76 was used as an overgo probe on plate 4 [well H2]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
ACCTAATCCACCAGCTCTTGCGAG
B sequence
TTGTCTGGTCTCTGTGCTCGCAAG
AB sequence
ACCTAATCCACCAGCTCTTGCGAGCACAGA
Marker sequence
CTTTTTTTTTTTAGGAGAAATAAAGAAAAAGCTTTTGATTATTAAGGTTA
AAATAAATAGAAGATTATGTACATATGATGATGGAATTGTAGCAGTCACA
TTCATTCCTAAAAAGCTCAAATCTCTATCAAACCTAATCCACCAGCTCTT
GCGAGCACAGAGACCAGACAATACCGAACCAGGCCAGAATACTTTCACCC
ATCATAGTACCCTAACTTTACCGGAAAATTTGCAGCAGAACAGATAGCAG
ATTTTGAACGCTTTTCTGATATCTTGTTGTTCCCCATCACAAACTTAGAA
CATAGTACGACGTCAGTAGAGGAAAATGATCGGCTCATGCTTAGCATAAA
GAAGATAACCAAATGCAGCACAAAAATGATGCCTCAAATAAAGGATCCCC
TCTCTGCCAACCCAGCTATATCAGTGTACCATTATGTACTTCGAATTGTG
TCCACTCGATCAATGACATCCAAAGCTTTGAGTCGATCCATGTTAAAAT
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of CT76  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D480 marker 480
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