SGN Marker CT133
SGN-M483
Synonyms |
Locus associations |
RFLP details |
Insert size
800
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TGCTCATTTCGGACCCGAATAGTGCGAAGTCAATCGGATTATTGTGCTTCCGTCAAGAGGACGCCGAGGCATTTCTTGCTCAGGTACGGT
TGCGGAAGAAGGAAGTGAGAGGTGGAGCTAAGGTAGTTCCGTTGACACTTGATCAGGTTTACATGTTGAAGGTTGAAGGAATCGCATTTC GTTTTTTGCCAGATCCCGTTCAAATTAAGAATGCAATGGAGTTAAAAGCTTCTGATGTAAAGACTGGATTTGATGGAGTCCCTGTTTTCC AGTCAGATCTCCTAGTTGTGAAAAAGAGAAACAGACGATACTGTCCAATATACTTTCGAAAGGAGGATATAGAAAAGGAGTTATCATCAA GGGCATTGAGAGGATCTAGTGTCTCTCAGCACATCATGGTAGGGACTTTGGAAGATGTCCTGAAAAAAATGGAGATAAGTCAGAGAAATT CTGGCTGGGAGGACCTTATCTTTATTCCCCC |
Reverse sequence
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTAAGGGACAACATGGTAGTTGTTCCCCCCCTTAAA
TATTCCAGCAAAAACTTGGTCATTTTTGGTTCTTCTTAAAGCCAATCCCGCCGGATGGGGCTTAACTATTTGGATTATTCGGGGCCACCC AGGGGAAAAGAAAAAGGGAACCCGCCCCTATATTGATTTGTTTCAAACAGGGGCTGGTTGCAAAAAATTTTTGCTTTAAAAACATCTTGA ATGGGGTGGGAAAGACTTTTACCCGGGGGAAAAAAAAAAAGGGCCCCCCCGCCAAAATTTCTCTGAATTATCCCCCTTTTTTTCAGGGAA TCTTCCAAAGGCC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U147852 | 481 (100.0% of RFLP seq) | + | |
SGN-U147852 | 6.6e-06 | 53 (14.2% of RFLP seq) | - |
SGN-U147852 | 2e-21 | 143 (38.3% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT133 was used as an overgo probe on plate 9 [well C11]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GCATTTCTTGCTCAGGTACGGTTG
|
B sequence
TCACTTCCTTCTTCCGCAACCGTA
|
AB sequence
GCATTTCTTGCTCAGGTACGGTTGCGGAAG
|
Marker sequence
TGCTCATTTCGGACCCGAATAGTGCGAAGTCAATCGGATTATTGTGCTTC
CGTCAAGAGGACGCCGAGGCATTTCTTGCTCAGGTACGGTTGCGGAAGAA GGAAGTGAGAGGTGGAGCTAAGGTAGTTCCGTTGACACTTGATCAGGTTT ACATGTTGAAGGTTGAAGGAATCGCATTTCGTTTTTTGCCAGATCCCGTT CAAATTAAGAATGCAATGGAGTTAAAAGCTTCTGATGTAAAGACTGGATT TGATGGAGTCCCTGTTTTCCAGTCAGATCTCCTAGTTGTGAAAAAGAGAA ACAGACGATACTGTCCAATATACTTTCGAAAGGAGGATATAGAAAAGGAG TTATCATCAAGGGCATTGAGAGGATCTAGTGTCTCTCAGCACATCATGGT AGGGACTTTGGAAGATGTCCTGAAAAAAATGGAGATAAGTCAGAGAAATT CTGGCTGGGAGGACCTTATCTTTATTCCCCC |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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