SGN Marker TG231

SGN-M487

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1200
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG231 image not available
Forward sequence
AAACTTTTTTTGCATAATAAATTGCTTAGCTATCTAAAAATTTCTATAGGTTGTATTAGTTTGTTGTATTTCAGCTTTTTGAATTTTCAT
CATGTAGATCTTCTGCAAATTATGTGTTGAAGTTGACTATAAAACTCTCCTATGCTTAATAAAACTATTGAGAGACATTTTCAATTAATA
CTATTTCCACCATCCTTTAAAAAACCAACAGTCAAATAGTGTATTTGGCTGTAATTCTAATTAAGATTTTTCTAGAGATACTTCCACTCT
ATCTCGACATGCATGTTTACATGACAGAATAGATGATTAATGATTTCCCCAGGTCTGGAATAATATGCCCCATCTACCAGATCTCAAACA
TAAATCAAACAGATAGCTTCATATTCCCTTTCTTGGTTAATGTTCCATCCTGATTGAAGGGAAACAAGCAATAACAAGTTCTTTTCCAGA
ATATCATTCTTGATGCATGCACATTCTCGTTAGTGTTTGAGAACCTTAATCTGCTGGCAACAGT
Reverse sequence
TATAGGGAGACAGCTTGCATGCCTGCAGAAAGTTATTGCACGTGCAGCAAAGCAATCAGAATTCATTCTGTGGAAAATTAATAAGCAGTC
TCTTTGGGAACATATTCTAGATGAAATGTACCATGCTGCCCTAAATTTGAGATTGAGAATAACACATGAGAAAGAACAGGAAAAAGAGGT
TTGTTTACAGATCTCTCTTATCAAGTTTTTACTTTGTATCTATTGCTTGTTTATTTTTGTGTTGCATTCATCTTCTATCATCATTAACTT
TGCAAGTATGGGTGAGTAGATATATCTGTTAATTAACCAAATAATTAGTTATCTTTTGATTGCGGCAGCCGTATGTATTTGCATTCATCT
TCATTTTAGGTCCGGCATCTTCTGATGAAAGATGATTGAGTGAGATCAAAGTTCTCCCTTTGTTCATCTAAGACAGACATATCAATTTGC
TATGAATTGGTCAGCCTACAGAGTGGCATGAACCATAAAGGAGTTCAAAAGGAACAAAATAGTCTTTCTAGTTTTACTTTGAGACATGAA
CCACATATGTCAA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1711932.8e-1593 (16.8% of RFLP seq)-
SGN-U1470429.6e-77152 (27.5% of RFLP seq)-
Mapped locations  
Map: Potato meta-QTL consensus map   
Map version
107 (location: 53227)
Chromosome
6
Position
32.30 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_6 MQTL_1_Maturity_6 MQTL_2_Late_blight_6 MQTL_2_Maturity_6
Potato meta-QTL consensus map

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9282)
Chromosome
6
Position
8.60 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 9283)
Chromosome
6
Position
10.50 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992
Overgo hybridization and physical mapping 
TG231 was used as an overgo probe on plate 2 [well H3]

Plausible BAC Matches:   None

 Non-Plausible BAC matches

P178F20,   P005N03,   P264C22,   P261J18,   P081A20,   P327L08,   P205I15,   P244J01,   P201J13,   P322J08,   P082F06,   P169B19,   P283N20,   P238O10,   P336K15,   P200N14,   P148L17,   P116C15,   P188N10,   P267M20

 Overgo Sequences

A sequence
CTAGAGATACTTCCACTCTATCTC
B sequence
TGTAAACATGCATGTCGAGATAGA
AB sequence
CTAGAGATACTTCCACTCTATCTCGACATG
Marker sequence
AAACTTTTTTTGCATAATAAATTGCTTAGCTATCTAAAAATTTCTATAGG
TTGTATTAGTTTGTTGTATTTCAGCTTTTTGAATTTTCATCATGTAGATC
TTCTGCAAATTATGTGTTGAAGTTGACTATAAAACTCTCCTATGCTTAAT
AAAACTATTGAGAGACATTTTCAATTAATACTATTTCCACCATCCTTTAA
AAAACCAACAGTCAAATAGTGTATTTGGCTGTAATTCTAATTAAGATTTT
TCTAGAGATACTTCCACTCTATCTCGACATGCATGTTTACATGACAGAAT
AGATGATTAATGATTTCCCCAGGTCTGGAATAATATGCCCCATCTACCAG
ATCTCAAACATAAATCAAACAGATAGCTTCATATTCCCTTTCTTGGTTAA
TGTTCCATCCTGATTGAAGGGAAACAAGCAATAACAAGTTCTTTTCCAGA
ATATCATTCTTGATGCATGCACATTCTCGTTAGTGTTTGAGAACCTTAAT
CTGCTGGCAACAGT
Genomic location of TG231  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D487 marker 487
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)