SGN Marker CT81
SGN-M504
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
350
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image
CT81 image not available
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|
Forward sequence
CGATCTCCATAACTGCTGCTGCTGTTATTATGCTTTTCGTCGTCTCAGAGGGGGAGAGACGCACAACGAACGCAAAAAACAAAATAATAT
CGAAACTAGAAGAGTAATTCGAAAAAAAATATATTTTTATCATATATTTATATAATTCGAAGTCATGAATTTGTTGTGTGAAAAATTCAT CCCCTTCTCTGAATTGTTATTTTGAAGAATTAAATCCTTTTTAATTTTTTTTTTTCCAGTGTTCTACAGAAAGATTGTGGCTTTACAGTT TCTTTTAAAAAAAAAAAAAA |
|
Reverse sequence
TTTTTTTTTTTTTTAAAAGAAACTGTAAAGCCACAATCTTTCTGTAGAACACTGGAAAAAAAAAAATTAAAAAGGATTTAATTCTTCAAA
ATAACAATTCAGAGAAGGGGATGAATTTTTCACACAACAAATTCATGACTTCGAATTATATAAATATATGATAAAAATATATTTTTTTTC GAATTACTCTTCTAGTTTTGATATTATTTTGTTTTTTGCGTTCGTTGTGCGTCTCTCCCCCTCTGAGACGACGAAAAGCATAATAACAGC AGCAGCAGTTATGGAGATCG |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U143895 | 2e-119 | 276 (95.2% of RFLP seq) | + |
| SGN-U143895 | 9e-122 | 276 (95.2% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 2000 |
|  Tomato-EXHIR 1997 |
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
CT81 was used as an overgo probe on plate 14 [well B9]
Plausible BAC Matches: P079M24, P211P06, P168G04, P104D02, P072A06, P060J24
Overgo Sequences
|
A sequence
CTCCATAACTGCTGCTGCTGTTAT
|
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B sequence
GACGACGAAAAGCATAATAACAGC
|
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AB sequence
CTCCATAACTGCTGCTGCTGTTATTATGCT
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Marker sequence
CGATCTCCATAACTGCTGCTGCTGTTATTATGCTTTTCGTCGTCTCAGAG
GGGGAGAGACGCACAACGAACGCAAAAAACAAAATAATATCGAAACTAGA AGAGTAATTCGAAAAAAAATATATTTTTATCATATATTTATATAATTCGA AGTCATGAATTTGTTGTGTGAAAAATTCATCCCCTTCTCTGAATTGTTAT TTTGAAGAATTAAATCCTTTTTAATTTTTTTTTTTCCAGTGTTCTACAGA AAGATTGTGGCTTTACAGTTTCTTTTAAAAAAAAAAAAAA |
| Related Markers
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
| Genomic location of CT81
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| User comments |
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