SGN Marker TG402

SGN-M569

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1500
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
TG402 image not available
Forward sequence
ATAAATATTTCTAAACAACGAATTCTCATAAGCAGAATGTTTTACAGTTGACAGGTTACCTCCTCGTGTCCTCTTCTTCAATAACTATAC
CAGTCATTCAAGAGATGGATATCCAAGCCTCTCTCTGGAAGGCAGCTATTCTTGCTGTTTGCATGTCATTTGCTGCTTTCATGGTCCTTG
CAGTGTCTGCACTTTTATCACGCTACAAGCTGTGCAAAAGGATCATATGGTGATGGACTGGGAATTGAACGTGCAGCCTTCAACTCCAGG
ATTGACAAAGCAATCGTAGTGTAAAATGGGACATGATTTCTTCGATCTGCTTGAAGCATCACAAGAAGCAATTGGGTGGCAGATACCAAA
TATCCTCTACTACACTAATGGTCTGGTAGAAATTGATAACAGTAAGAAGAGGGTTTCAGAAGTTTATAGCAAAGAATAGAAATATTTTTG
GAGGAAAATATCCATATACACTATGAATTGTTGTCCCACCGCCATGGTGAATGAAC
Reverse sequence
TTGCTTGCCTGCAGAATTACATGGTGATCTTAGCAAACTTGTGAGATCAACAATCTTAAAGAAGTTCAGAAATGGGGAGATTAGAGTGCT
GCTAACGAATGAGCTTTCAGCTAGAGGCTTGGATTTACCTGAATGTGATCTTGTAGTTAATCTGGGGTTACCTACTGACTCGGCTCATTA
TGCTCATCGAGCTGGTCGTACGGGCAGGCTTGGTCGCAAGGGCACGGTAGTAACCATATGTGAAGAGTCAGAAGTCTTTGTGGTAAAAAA
GCTACAGAAGCAACTTTCCCTCTCTATCGAGGCATGTGAATTTTCTGAGGGAAATCTTGTCATTATAGAAGATTAAACTGCATAGCACTT
GCTTCTGTCAAGTTTTAACTAGACAAATCACTAAAGACAACTGAAATTTGTTTACTAGTGGTGAGAGCTGAAATGTTGTTGCTTGCCATT
AAACATGCCAATTCAGATGACATTTTGCCTTCTAAAGAATGTGCC
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1637766.6e-1967 (13.5% of RFLP seq)-
SGN-U1665613.1e-3371 (14.3% of RFLP seq)-
Mapped locations  
Map: Potato meta-QTL consensus map   
Map version
107 (location: 53298)
Chromosome
8
Position
96.44 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_8 MQTL_1_Maturity_8 MQTL_2_Late_blight_8
Potato meta-QTL consensus map

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9502)
Chromosome
8
Position
82.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 9503)
Chromosome
8
Position
44.00 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992
Overgo hybridization and physical mapping 
TG402 was used as an overgo probe on plate 12 [well F4]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
GATATCCAAGCCTCTCTCTGGAAG
B sequence
CAGCAAGAATAGCTGCCTTCCAGA
AB sequence
GATATCCAAGCCTCTCTCTGGAAGGCAGCT
Marker sequence
ATAAATATTTCTAAACAACGAATTCTCATAAGCAGAATGTTTTACAGTTG
ACAGGTTACCTCCTCGTGTCCTCTTCTTCAATAACTATACCAGTCATTCA
AGAGATGGATATCCAAGCCTCTCTCTGGAAGGCAGCTATTCTTGCTGTTT
GCATGTCATTTGCTGCTTTCATGGTCCTTGCAGTGTCTGCACTTTTATCA
CGCTACAAGCTGTGCAAAAGGATCATATGGTGATGGACTGGGAATTGAAC
GTGCAGCCTTCAACTCCAGGATTGACAAAGCAATCGTAGTGTAAAATGGG
ACATGATTTCTTCGATCTGCTTGAAGCATCACAAGAAGCAATTGGGTGGC
AGATACCAAATATCCTCTACTACACTAATGGTCTGGTAGAAATTGATAAC
AGTAAGAAGAGGGTTTCAGAAGTTTATAGCAAAGAATAGAAATATTTTTG
GAGGAAAATATCCATATACACTATGAATTGTTGTCCCACCGCCATGGTGA
ATGAAC
Genomic location of TG402  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D569 marker 569
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