SGN Marker TG261
SGN-M577
Synonyms |
Locus associations |
RFLP details |
Insert size
1200
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG261 image not available
|
Forward sequence
CCGTGTGCTGGCACATTTATGATTCAGTTCTCAGAATGTGATTGGCATTATTTGCCTGAACTTTAAATGAGAGTTAACTGTTCGTATCCA
ATTGGGATTTACATGGATACATGCTATGGTTCACTGCTTCTTCCTATTCTGTATGTTCAGCAATACACTTCTCCATTACACTTGCCTTGT GACAGTTCTAGGGTGATGTTGATAAGCGTGATAATATCTCTTCTTCTCCAGCATAGTTCTATGTATATGATGGGCAGTTAGTTTCAAAAG TTTTGGTATTTATGCTTCGTCATGATGCTTAATTAAGAGCCATTTTTTTAACATTTAATTTTTTTTTCCAAAAGAGCCAGATCCATATAG GTAATATCAGTTAGTTAAGACGCAGCTAATTATTTTTCAATGAACAGGTGTTTGGTTTAGATAAACCATAATTGCCTTTAAAAGGCCAAG TATTATGCATTGGAATGAAATGGGCCTGAATGGATATAGAG |
Reverse sequence
AATCAAAATTTCTGCTGAACCTGCGCCCCTCTTAGCAAAGGTCAACTAGCTGTTCATTTGGGTCTCAAATAGGAAAGAGAAAGAGTTTGG
TCCAACTTCCCTTCTCCTCCTTCATTCTCTATTAAATAGAATGACCCCCCCCCCCAAAAGGTTCACCAACAAATATCACTAAACCTCTCA TTAGGCTGCCAAATTTAGTTTAAGAAAAGCTTCCAATAATTTGAAGTATTAAACCAAAGTGGACTTCCCATAAAAACTAACCTCAGGGTC CTCCAAAGCACCAGCAACCTCATGAAAATCAATTTTGGGTGCCACAGATATGCCAGCTCCATGAAAAGATACAACTCTTTTCTCTCCGAT ATTTTTCTCAACCTGTACTATCGCAAGCAGGGATATGTAAAAAAACATAGTCATCACAGAAACAAACATAATTGACACAGGACCAACCTG GGCGGGAGGGGGCATAATATCATGGCACAATATTGCTAGAGGATAAATGTGACCAGGGACACC |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U158825 | 4.2e-57 | 111 (22.6% of RFLP seq) | + |
SGN-U158825 | 9e-157 | 278 (56.6% of RFLP seq) | + |
SGN-U151269 | 1.3e-32 | 70 (13.6% of RFLP seq) | - |
SGN-U151269 | 1.8e-59 | 115 (22.4% of RFLP seq) | - |
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG261 was used as an overgo probe on plate 12 [well C5]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CACTTCTCCATTACACTTGCCTTG
|
B sequence
CACCCTAGAACTGTCACAAGGCAA
|
AB sequence
CACTTCTCCATTACACTTGCCTTGTGACAG
|
Marker sequence
CCGTGTGCTGGCACATTTATGATTCAGTTCTCAGAATGTGATTGGCATTA
TTTGCCTGAACTTTAAATGAGAGTTAACTGTTCGTATCCAATTGGGATTT ACATGGATACATGCTATGGTTCACTGCTTCTTCCTATTCTGTATGTTCAG CAATACACTTCTCCATTACACTTGCCTTGTGACAGTTCTAGGGTGATGTT GATAAGCGTGATAATATCTCTTCTTCTCCAGCATAGTTCTATGTATATGA TGGGCAGTTAGTTTCAAAAGTTTTGGTATTTATGCTTCGTCATGATGCTT AATTAAGAGCCATTTTTTTAACATTTAATTTTTTTTTCCAAAAGAGCCAG ATCCATATAGGTAATATCAGTTAGTTAAGACGCAGCTAATTATTTTTCAA TGAACAGGTGTTTGGTTTAGATAAACCATAATTGCCTTTAAAAGGCCAAG TATTATGCATTGGAATGAAATGGGCCTGAATGGATATAGAG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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