SGN Marker TG572
SGN-M58
Synonyms |
Locus associations |
RFLP details |
Insert size
1700
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image |
Forward sequence
TGCTGCTCATGCGGATAAAAATGGCCGTCGGAAGTTGGCTGCCATGCTTGTTGAACATGAACCACGTTCATCTAAGCAGGTTTTGTTAAT
TCTTTTAAATGCCTTTTGTCTTTCTATTAATATCCTTTTTTTGGAACTCTTTCATGTTTACTGATGGAGCCTAGAACTTCTTATCTCTTA ATGATAGATGTTCTCATCTAAGGGAACTTCTTTGTTCTTCGCTGGCTTTAATCTGTTGATTGGATTTCTGTGACCAAAATGTACGACATG GTTAGCTTTCATTAGCTTGTGGTGCACTAACTACGTTATTCCTCTAGGTTCCTCTCTTGCTAAGCATTGGAGAAGAGGATACTGCTCTAA TGAAGTCAACTGAAAGTGGTGATACTGATTTAGTTTATCTTGTCCTGTTCCACATCTGGCAAAAGGTACATATAAACACCGGTCTGGAGT AGATTTTCTTGTAACCCAAGTCCTTTTTTTCCTTTCTAAACTACTAGTTGGTTCAGTTATTAATAACCACATGCTTTTTTTCCCCCAGAG ACCAGCTTTGGATTTCTTTGGGACAATACAGGCCAGACCTCTAGCTCGTGATTTGTTTGT |
Reverse sequence
CTAGCACACTGGACTTATATGATAGGAAGGCTTTTCTTACCGGTTAGAAATGTTATCAGGTGCCTAAAACTAAGCCTAATGCACACTCAG
CATCACTCAGAAGAAGCAATTGAATAGACCATCAACTCAAGACAACAAGCAGGAACAAAAAAAAAGAGAAGCAAGAGCAAGCAAAAGAAA TAATGAAACAGCTCCACTGAATCATCAACTCAATGACTTGATAACTAATACTGAAGGAAATGGCACCTTAACAATTTTGCATGCTCTTCA GCAGCTTTTGATTCAAAAAAATTTTCCTTTGTTTCTACAAATAGATGCTGGGCCTTCTCAATGAGTTTTACTCTTGGACCATGAAGTGGA GATCCTTTGCTAGCCATGGGATTCTTAGACAATTCCCATGACTCTTTCCATAACAGAAAAGCTACATCCTACAACATTGAAACTTTGTCA GATAGCGAAAGTTGAATGAAGGAAAAGTAGAGAGAATCGCCATGAACTGTATAAATACTAGCTTTTTTTAGCAGCAAAATTTACATGTCT TGACAATTTAAGCTTAAAAAAGATACAGCAGACAGGATTATAGAGCAATTACACGGGATTCCAGAAGTAGGCAAATTGAAAAATTGTTAA AAGAGTTCCTACATAAAAATTATTGGTAAATAACTCCTACAATATTCTTTTACCAAATTCCATCTACTAAGAAATATAAATGTAAGGATA TGAGCACAATATCCAAATTAAAAATTGATAATAGTTCCTAGA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U170798 | 1.2e-32 | 70 (9.2% of RFLP seq) | - |
SGN-U170798 | 9.9e-55 | 107 (14.0% of RFLP seq) | - |
![]() |
| ![]() Potato meta-QTL consensus map |
| ![]() Tomato - Kazusa and SolCAP markers mapped to genome |
| ![]() Kazusa F2-2000 genetic map |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Potato-TXB 1992 |
Overgo hybridization and physical mapping |
TG572 was used as an overgo probe on plate 8 [well D5]
Plausible BAC Matches: None
Non-Plausible BAC matches
Overgo Sequences
A sequence
GAGAATGATAGAGGCGAAATGCCG
|
B sequence
CTGCGGGCTCAAATATCGGCATTT
|
AB sequence
GAGAATGATAGAGGCGAAATGCCGATATTT
|
Marker sequence
TCCTTGAGCTTTTCGTCCACCATGTTCACAGCTGATTTAATATGAGAAAA
TCCCTCATCAAGTAAACTCGTGATATCAATTTTATGCTGAGAATGATAGA GGCGAAATGCCGATATTTGAGCCCGCAGCTTCTCTTCTGAAAGAATCTGC ATGTTTGTCCTTTCAGTAATTAATACAAACACTGGTGCTTATATTCCATT TCAGAAAAACAAAATTCGTACTTTCTGTTTTTCCAGTGCGCGCACTTTTT TCTTCAAGTGATTTTCTATTTCAAGACCCTGAAAACCAACACAATTTTTT TTAAAAAAAAAAAAGAGAGAGAGAGAAGAGAGCAATGAAATGATTAAGAA TAGAGTAGAACAATAAGTTCCTGCAATATTGAACAAAGAGCAGATGAGAA ACTACATACTACTTGTAGCTTGTTCTGAAGATTATCCAAAGATTTTCGTA GTGTCTCCAC |
![]() |
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
![]() |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)