SGN Marker TG193

SGN-M586

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
1210
Vector
pGEM4Z
Cutting Site
PST1
Drug Resistance
AMP
Image
Forward sequence
TTTTGTACTTTCTTTTCCTTTTTTTCCTCCTTGAAACAGGGTGTGTGCAGAGTAAGTGGTTGTTTTGAACATTAAAAGCACAAATTTGAG
CCTTCAAGTGCATTTAGACCCTTCATTGCAAATGATATGTGCAGCTACATATTGTGTTTCAACTACCTTTCTTGATGTTCTCAAACATAA
CTCATTTTTTAATTACATTTGTTTGATTGCAGGCACCTGAGATTGCCAAATGTTCTGTGTGTGGAAGAAACTTGTGTAAGTTGTAGTGTT
GCACGTACTGTGCTCTATATGTTCTCTATTTCCAATTGAAAGTCCAATTTGACTTTCTAAGATCAAGCAGGGCATTTTAATTTTTAAATT
GAAATCATATATAAATGTTTAACTACTTGACGCAGATTAAAAAAAGCTTCTAATTGATGATACTTGTGTGAAATTTCAATTTCTAATTTT
GTCGTCAAATAGAAAAAGAACGTTAAAAGCAAGTTAGGAAATGCTGGTTTAATGTATATT
Reverse sequence
GAAATCCGCTATACCTCCCTGATGATAGCAAAGATATCAGTCCAGCTGGCGAGGATTGAAAGTTGTTCTCTAGGAAGTTTGATGTCTTGA
TTGAGAAATGTTGCATCCCAAGTGCTTGAGGATTGTGCATGCATAGCAAGTCACAAATTGCATCAAGAGAAGAAACTGTAAACTTGCAAT
GCATGAATTTAATTGACTTAAGGGATCGATAGTTCTGGCTGATGAGTTTGCATAACCCCTCGACCTGTAAGGTTGAAAGCCACAAGAAAA
GCAGTGTAAATAGTTAATTCTTCAGCATAACAAGTTCTAATCCAGAAGATATAACTGTTCAAAACAAAGAAACGTTTGCAAATTTCATTA
TTACTACAGATGCCAAACAGAAAATGCACAAGCACTTGAGACAACAATTATGTTTCACACATTTAGTTCTGACTTGAATTCCAGAAATAA
ATGTATGTCAAAGTATATATTAGGATCTGATGCCAATGGCATGTCTTGAATCTTATGTCAAACA
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1533499.2e-4399 (19.3% of RFLP seq)-
Mapped locations  
Map: Potato meta-QTL consensus map   
Map version
107 (location: 53209)
Chromosome
6
Position
74.27 cM
Confidence
uncalculated
Protocol
unknown

MQTL_1_Late_blight_6 MQTL_1_Maturity_6 MQTL_2_Late_blight_6 MQTL_2_Maturity_6
Potato meta-QTL consensus map

Map: Tomato-EXPEN 2000   
Map version
52 (location: 39936)
Chromosome
6
Position
97.80 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 2000

Map: Tomato-EXPEN 1992   
Map version
28 (location: 9547)
Chromosome
6
Position
94.00 cM
Confidence
I
Protocol
RFLP


Tomato-EXPEN 1992

Map: Potato-TXB 1992   
Map version
27 (location: 9549)
Chromosome
6
Position
54.40 cM
Confidence
I(LOD2)
Protocol
RFLP


Potato-TXB 1992
Overgo hybridization and physical mapping 
TG193 was used as an overgo probe on plate 2 [well D12]

Plausible BAC Matches:   P041L02,   P221F06

 Overgo Sequences

A sequence
CCTTTTTTTCCTCCTTGAAACAGG
B sequence
CTTACTCTGCACACACCCTGTTTC
AB sequence
CCTTTTTTTCCTCCTTGAAACAGGGTGTGT
Marker sequence
TTTTGTACTTTCTTTTCCTTTTTTTCCTCCTTGAAACAGGGTGTGTGCAG
AGTAAGTGGTTGTTTTGAACATTAAAAGCACAAATTTGAGCCTTCAAGTG
CATTTAGACCCTTCATTGCAAATGATATGTGCAGCTACATATTGTGTTTC
AACTACCTTTCTTGATGTTCTCAAACATAACTCATTTTTTAATTACATTT
GTTTGATTGCAGGCACCTGAGATTGCCAAATGTTCTGTGTGTGGAAGAAA
CTTGTGTAAGTTGTAGTGTTGCACGTACTGTGCTCTATATGTTCTCTATT
TCCAATTGAAAGTCCAATTTGACTTTCTAAGATCAAGCAGGGCATTTTAA
TTTTTAAATTGAAATCATATATAAATGTTTAACTACTTGACGCAGATTAA
AAAAAGCTTCTAATTGATGATACTTGTGTGAAATTTCAATTTCTAATTTT
GTCGTCAAATAGAAAAAGAACGTTAAAAGCAAGTTAGGAAATGCTGGTTT
AATGTATATT
Genomic location of TG193  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D586 marker 586
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)