SGN Marker TG268
SGN-M589
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
1930
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG268 image not available
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Forward sequence
ACTTATTCAATCAAAGTGAATACTCTATAACACATTGCTATAGGGAGATTAATCAAGTGGCGGACAAGACAACTTCTCTTAGTCACAACT
ACAACACCAACATTTTATACTCTAACAGTGGTGAACTCCCCTCCCAAATCAAAGGGCTTATAGCAATTGATTGTTGGAGTCTTTCGTTTA TAAGAGTCTCCAACAAAAGGAAGACAGATTTTACTTTCGACCCTCCGTGACAAATTCATAAGATCCTCCCATATTTGTGTATAAATGGTA TTAGTCACATGGGATACCTATCTTAGGCATTTACCTTTTCATCTCAACTACAATAGGTACATTATCCCATATTCCACACGGAGGGAAAAA TTAGGTTGTGTGTCTGCCTCAAATCAACTGCAATGGTGTGTTTTGGAAGATGAATAAAATTGTTTGTAAAAAAAAAAAA |
|
Reverse sequence
GACTCACTATANGGAGACAGCCTGCATGCCTGCAGGGATGGAAACTGCTGCATCAGGTTTTTCGATGGAGCAAGAGTTGGCTGATTGGTC
GGAACTTCAATATGATCTGCTTGTTCTAATTGCTAGGCGTTTGAATCTCATTGAAGACTATCTAAATTTTGGCACTGTCTGCAAATCCTG GCACTCTGTGTCCACCAAGGACAATTTCAACAATTACCTCTGTAGAGCTCCTTGGTTGATGCTAGCGGAGGAAGAGGATGATGACGGAAA TTCCATTCGGAAATTCTTCAGCCTCTATAATGGCATGATTTTGAACAAGAGAATTCCGAAAGCCCGCAGAAAACGGTGTATGGAGTCTAT GGGTTGGCTTATCATGGTAGGAGAAGAGGAAGGTGAAATTAGTATGCTGCATCCCTTCTCTGGTGTTGAAATTGAATTACCCCATCAAAA TACCACCGTAGAATACAATCGTTACCGGACTGGCTTGAAGATGTACTTTTTTTACAAGGCAGTTTTGTCCTCTAGTCCTTCTCATACATC CGACTACATTCTCGTG |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U154920 | 9.9e-06 | 45 (8.1% of RFLP seq) | - |
| SGN-U151695 | 1.6e-07 | 48 (8.6% of RFLP seq) | - |
| SGN-U154920 | 1.7e-10 | 109 (19.6% of RFLP seq) | - |
| SGN-U154920 | 4.6e-17 | 92 (16.5% of RFLP seq) | - |
| SGN-U151695 | 1.5e-38 | 136 (24.5% of RFLP seq) | - |
| SGN-U151695 | 2.7e-49 | 160 (28.8% of RFLP seq) | - |
| SGN-U151694 | 345 (62.1% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
TG268 was used as an overgo probe on plate 9 [well G10]
Plausible BAC Matches: None
Overgo Sequences
|
A sequence
GCTATAGGGAGATTAATCAAGTGG
|
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B sequence
GAAGTTGTCTTGTCCGCCACTTGA
|
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AB sequence
GCTATAGGGAGATTAATCAAGTGGCGGACA
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Marker sequence
ACTTATTCAATCAAAGTGAATACTCTATAACACATTGCTATAGGGAGATT
AATCAAGTGGCGGACAAGACAACTTCTCTTAGTCACAACTACAACACCAA CATTTTATACTCTAACAGTGGTGAACTCCCCTCCCAAATCAAAGGGCTTA TAGCAATTGATTGTTGGAGTCTTTCGTTTATAAGAGTCTCCAACAAAAGG AAGACAGATTTTACTTTCGACCCTCCGTGACAAATTCATAAGATCCTCCC ATATTTGTGTATAAATGGTATTAGTCACATGGGATACCTATCTTAGGCAT TTACCTTTTCATCTCAACTACAATAGGTACATTATCCCATATTCCACACG GAGGGAAAAATTAGGTTGTGTGTCTGCCTCAAATCAACTGCAATGGTGTG TTTTGGAAGATGAATAAAATTGTTTGTAAAAAAAAAAAA |
| Genomic location of TG268
|
| User comments |
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