SGN Marker TG268
SGN-M589
Synonyms |
Locus associations |
RFLP details |
Insert size
1930
|
Vector
pGEM4Z
|
Cutting Site
PST1
|
Drug Resistance
AMP
|
Image
TG268 image not available
|
Forward sequence
ACTTATTCAATCAAAGTGAATACTCTATAACACATTGCTATAGGGAGATTAATCAAGTGGCGGACAAGACAACTTCTCTTAGTCACAACT
ACAACACCAACATTTTATACTCTAACAGTGGTGAACTCCCCTCCCAAATCAAAGGGCTTATAGCAATTGATTGTTGGAGTCTTTCGTTTA TAAGAGTCTCCAACAAAAGGAAGACAGATTTTACTTTCGACCCTCCGTGACAAATTCATAAGATCCTCCCATATTTGTGTATAAATGGTA TTAGTCACATGGGATACCTATCTTAGGCATTTACCTTTTCATCTCAACTACAATAGGTACATTATCCCATATTCCACACGGAGGGAAAAA TTAGGTTGTGTGTCTGCCTCAAATCAACTGCAATGGTGTGTTTTGGAAGATGAATAAAATTGTTTGTAAAAAAAAAAAA |
Reverse sequence
GACTCACTATANGGAGACAGCCTGCATGCCTGCAGGGATGGAAACTGCTGCATCAGGTTTTTCGATGGAGCAAGAGTTGGCTGATTGGTC
GGAACTTCAATATGATCTGCTTGTTCTAATTGCTAGGCGTTTGAATCTCATTGAAGACTATCTAAATTTTGGCACTGTCTGCAAATCCTG GCACTCTGTGTCCACCAAGGACAATTTCAACAATTACCTCTGTAGAGCTCCTTGGTTGATGCTAGCGGAGGAAGAGGATGATGACGGAAA TTCCATTCGGAAATTCTTCAGCCTCTATAATGGCATGATTTTGAACAAGAGAATTCCGAAAGCCCGCAGAAAACGGTGTATGGAGTCTAT GGGTTGGCTTATCATGGTAGGAGAAGAGGAAGGTGAAATTAGTATGCTGCATCCCTTCTCTGGTGTTGAAATTGAATTACCCCATCAAAA TACCACCGTAGAATACAATCGTTACCGGACTGGCTTGAAGATGTACTTTTTTTACAAGGCAGTTTTGTCCTCTAGTCCTTCTCATACATC CGACTACATTCTCGTG |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U154920 | 9.9e-06 | 45 (8.1% of RFLP seq) | - |
SGN-U151695 | 1.6e-07 | 48 (8.6% of RFLP seq) | - |
SGN-U154920 | 1.7e-10 | 109 (19.6% of RFLP seq) | - |
SGN-U154920 | 4.6e-17 | 92 (16.5% of RFLP seq) | - |
SGN-U151695 | 1.5e-38 | 136 (24.5% of RFLP seq) | - |
SGN-U151695 | 2.7e-49 | 160 (28.8% of RFLP seq) | - |
SGN-U151694 | 345 (62.1% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
TG268 was used as an overgo probe on plate 9 [well G10]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GCTATAGGGAGATTAATCAAGTGG
|
B sequence
GAAGTTGTCTTGTCCGCCACTTGA
|
AB sequence
GCTATAGGGAGATTAATCAAGTGGCGGACA
|
Marker sequence
ACTTATTCAATCAAAGTGAATACTCTATAACACATTGCTATAGGGAGATT
AATCAAGTGGCGGACAAGACAACTTCTCTTAGTCACAACTACAACACCAA CATTTTATACTCTAACAGTGGTGAACTCCCCTCCCAAATCAAAGGGCTTA TAGCAATTGATTGTTGGAGTCTTTCGTTTATAAGAGTCTCCAACAAAAGG AAGACAGATTTTACTTTCGACCCTCCGTGACAAATTCATAAGATCCTCCC ATATTTGTGTATAAATGGTATTAGTCACATGGGATACCTATCTTAGGCAT TTACCTTTTCATCTCAACTACAATAGGTACATTATCCCATATTCCACACG GAGGGAAAAATTAGGTTGTGTGTCTGCCTCAAATCAACTGCAATGGTGTG TTTTGGAAGATGAATAAAATTGTTTGTAAAAAAAAAAAA |
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