SGN Marker C2_At1g02180

SGN-M6476
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle300475 (SGN)
120488 (CGN)
---
Lycopersicon CombinedSingleSGN-U238254---
Solanum tuberosumSingleSGN-U256655---
ArabidopsisSingleAt1g02180 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38050)
Chromosome
7
Position
73.00 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 40975
Forward primer (5'-3')
TTTCTTCATCTCAGCTTCTGCTGCTA
Accessions and product sizes
Solanum lycopersicum TA209
275
Solanum pennellii TA56
275
Approximate temperature
55°C
Reverse primer (5'-3')
AGATACCAGCTCATCAGCAGGATT
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
275
Solanum pennellii TA56
175
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 24872)
Chromosome
1
Position
0.41 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g02180  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6476 marker 6476
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