SGN Marker C2_At1g02400

SGN-M6478
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U200447---
Lycopersicon CombinedMultipleSGN-U216196---
Solanum tuberosumSingleSGN-U250089---
ArabidopsisSingleAt1g02400 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 24874)
Chromosome
1
Position
0.49 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 40977
Forward primer (5'-3')
TGATCTTGAATATATTCTCTTGGAAGC
Accessions and product sizes
Solanum pennellii TA56
800
Solanum lycopersicum TA209
800
Approximate temperature
55°C
Reverse primer (5'-3')
AAATTGAATTGTCTTCTATCCATAAACC
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
800
Solanum lycopersicum TA209
450
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At1g02400  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6478 marker 6478
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