SGN Marker C2_At1g09815

SGN-M6565
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U201091---
Lycopersicon CombinedSingleSGN-U227515---
Solanum tuberosumSingleSGN-U258039---
ArabidopsisSingleAt1g09815 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38081)
Chromosome
9
Position
101.20 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41017
Forward primer (5'-3')
AGCTATTGGTTCTAATGTTACTCAGCC
Accessions and product sizes
Solanum pennellii TA56
2000
Solanum lycopersicum TA209
2000
Approximate temperature
60°C
Reverse primer (5'-3')
ATTGCCTCAACACTTCCTCATTCTGAT
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
1050
Solanum pennellii TA56
1050
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 24963)
Chromosome
1
Position
3.19 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g09815  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6565 marker 6565
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