SGN Marker CT156
SGN-M657
Synonyms |
Locus associations |
RFLP details |
Insert size
500
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
Forward sequence
not available
|
Reverse sequence
TCTTCAAGGGATAAGGCTGCCAGCTCGAATGAGTACAAGTCTCAAAAAGAATAATGATGAAGTTGCTTGATTCTCGAGCAGGGAGGAGTG
AGATGCCAAGGCTAAATCGGAAGCAGCTGACTATCAGAAGCTTTTAGCGTCTAAGTTGAACGAACAGAGAGAAAGGCGAAGTGAGAGTTT GGCTAACAAGAGGTCTAGACTTTCTGCTGCCTCCAACCCATCTATTGCTGCTTAAGATCATTTCGAAAGA |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U143603 | 2.1e-20 | 141 (56.4% of RFLP seq) | - |
SGN-U143604 | 2.1e-23 | 142 (56.8% of RFLP seq) | - |
SGN-U150556 | 4.5e-46 | 96 (38.4% of RFLP seq) | - |
SGN-U143605 | 6.3e-73 | 157 (62.8% of RFLP seq) | - |
SGN-U143602 | 6.3e-73 | 157 (62.8% of RFLP seq) | - |
![]() |
| ![]() Tomato-EXPIMP 2009 |
| ![]() Sun1642 x LA1589 |
| ![]() Yellow Stuffer x LA1589 |
| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
| ![]() Eggplant-COSII |
| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXPEN 2000 |
| ![]() Tomato-EXHIR 1997 |
| ![]() Eggplant-LXM 2002 |
| ![]() Tomato-EXPEN 1992 |
| ![]() Tomato-EXPIMP 2001 |
Overgo hybridization and physical mapping |
CT156 was used as an overgo probe on plate 4 [well B3]
Plausible BAC Matches: None
Overgo Sequences
A sequence
GAGATGCCAAGGCTAAATCGGAAG
|
B sequence
TTCTGATAGTCAGCTGCTTCCGAT
|
AB sequence
GAGATGCCAAGGCTAAATCGGAAGCAGCTG
|
Marker sequence
TCTTCAAGGGATAAGGCTGCCAGCTCGAATGAGTACAAGTCTCAAAAAGA
ATAATGATGAAGTTGCTTGATTCTCGAGCAGGGAGGAGTGAGATGCCAAG GCTAAATCGGAAGCAGCTGACTATCAGAAGCTTTTAGCGTCTAAGTTGAA CGAACAGAGAGAAAGGCGAAGTGAGAGTTTGGCTAACAAGAGGTCTAGAC TTTCTGCTGCCTCCAACCCATCTATTGCTGCTTAAGATCATTTCGAAAGA |
![]() |
Related Genotyped Markers: These markers have been genotyped and share a name with this marker
![]() |
User comments |
Please wait, checking for comments. (If comments do not show up, access them here)