SGN Marker C2_At1g12680

SGN-M6596
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle310125 (SGN)
132201 (CGN)		---
Lycopersicon CombinedSingleSGN-U225081---
ArabidopsisSingleAt1g12680 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38094)
Chromosome
1
Position
136.70 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39386
Forward primer (5'-3')
TGACACTGAAGGCTGTGTATGAGGATG
Accessions and product sizes
Solanum lycopersicum TA209
1050
Solanum pennellii TA56
1050
Approximate temperature
55°C
Reverse primer (5'-3')
TCAGGAGCAACATAAGCTGGACTTCC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
1050
Solanum pennellii TA56
750
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 24995)
Chromosome
1
Position
4.32 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At1g12680  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6596 marker 6596
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