SGN Marker CT278

SGN-M670

SynonymsNone
Locus associationsNone
RFLP details 
Insert size
900
Vector
pBLUESC
Cutting Site
EcoR1
Drug Resistance
AMP
Image
CT278 RFLP image
Forward sequence
not available
Reverse sequence
CATTTGTACCAGGCCAAATTGAAAGGAGATTTATTGAGGTACCATTTGGTGCTACCTGGGTGGAGGCCACCATGAGGACATATGGGTTTG
ATACGGCTAGAAGATTCTTCATAGATACTGTTCAGCTCTCCCCATTGCAAAGGCCCATTAAGTGGGAAAGCGTGGCCACATTTTCATCAC
CTTCATCCAAAAACTTTGTGTTTCGAGTGGAGGGTGGTCAGACAATGGAACTAGCAATAGCCCTTTTTTGGTCCAGCGGCATAGGCAGTC
ATGAAACAACTATTGTTGATTTTGAGATTGCATTCCGTGGTATAAAGATCAGCAAAGAGGAAGTAGTTCTTGATGGAAGCGAAGCACCTG
TGAGGATTGATGCTGAAGCTCTTCTGTCAACTGAAAAACTTGTCCCTTCTGCTGTGCTCAACAAGATAAGAGTTCCGTATCGTCCAATTG
ATTGCAAACTGCATGCACTTTCAGCAGATCGGGACAAATTACCCTCAGGAAAACAGATTCTGGCTCTTACATTAACTTACAAATTCAAAC
TGGAGGATGATGCTGAACTGAAGCCTCAGATTCCTTTACTTAACAATCGAATCTATGATAACAAATTTGAGTCTCAGTTTTATATGATAT
CGGATGTGAATAAGCGTGTGCATGCTAAGGGTGATGTTTATCCAGATTCTTCCAAACTTCCGAAGGGTGAATATACTGTACAGCTATATC
TGAGGGCATGACATGTACAGTACCT
RFLP sequence matches to unigenes 
Unigenee valueMatch length (bp)Strand
SGN-U1473212.6e-96193 (25.9% of RFLP seq)-
SGN-U147985585 (78.5% of RFLP seq)-
Mapped locations  
Map: Tomato-EXPEN 1992   
Map version
28 (location: 9779)
Chromosome
3
Position
47.50 cM
Confidence
I(LOD2)
Protocol
RFLP


Tomato-EXPEN 1992
Overgo hybridization and physical mapping 
CT278 was used as an overgo probe on plate 4 [well A2]

Plausible BAC Matches:   None

 Overgo Sequences

A sequence
CATTGCAAAGGCCCATTAAGTGGG
B sequence
AATGTGGCCACGCTTTCCCACTTA
AB sequence
CATTGCAAAGGCCCATTAAGTGGGAAAGCG
Marker sequence
CATTTGTACCAGGCCAAATTGAAAGGAGATTTATTGAGGTACCATTTGGT
GCTACCTGGGTGGAGGCCACCATGAGGACATATGGGTTTGATACGGCTAG
AAGATTCTTCATAGATACTGTTCAGCTCTCCCCATTGCAAAGGCCCATTA
AGTGGGAAAGCGTGGCCACATTTTCATCACCTTCATCCAAAAACTTTGTG
TTTCGAGTGGAGGGTGGTCAGACAATGGAACTAGCAATAGCCCTTTTTTG
GTCCAGCGGCATAGGCAGTCATGAAACAACTATTGTTGATTTTGAGATTG
CATTCCGTGGTATAAAGATCAGCAAAGAGGAAGTAGTTCTTGATGGAAGC
GAAGCACCTGTGAGGATTGATGCTGAAGCTCTTCTGTCAACTGAAAAACT
TGTCCCTTCTGCTGTGCTCAACAAGATAAGAGTTCCGTATCGTCCAATTG
ATTGCAAACTGCATGCACTTTCAGCAGATCGGGACAAATTACCCTCAGGA
AAACAGATTCTGGCTCTTACATTAACTTACAAATTCAAACTGGAGGATGA
TGCTGAACTGAAGCCTCAGATTCCTTTACTTAACAATCGAATCTATGATA
ACAAATTTGAGTCTCAGTTTTATATGATATCGGATGTGAATAAGCGTGTG
CATGCTAAGGGTGATGTTTATCCAGATTCTTCCAAACTTCCGAAGGGTGA
ATATACTGTACAGCTATATCTGAGGGCATGACATGTACAGTACCT
Genomic location of CT278  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D670 marker 670
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