SGN Marker CT278
SGN-M670
| Synonyms |
| Locus associations |
| RFLP details |
|
Insert size
900
|
Vector
pBLUESC
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Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
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Forward sequence
not available
|
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Reverse sequence
CATTTGTACCAGGCCAAATTGAAAGGAGATTTATTGAGGTACCATTTGGTGCTACCTGGGTGGAGGCCACCATGAGGACATATGGGTTTG
ATACGGCTAGAAGATTCTTCATAGATACTGTTCAGCTCTCCCCATTGCAAAGGCCCATTAAGTGGGAAAGCGTGGCCACATTTTCATCAC CTTCATCCAAAAACTTTGTGTTTCGAGTGGAGGGTGGTCAGACAATGGAACTAGCAATAGCCCTTTTTTGGTCCAGCGGCATAGGCAGTC ATGAAACAACTATTGTTGATTTTGAGATTGCATTCCGTGGTATAAAGATCAGCAAAGAGGAAGTAGTTCTTGATGGAAGCGAAGCACCTG TGAGGATTGATGCTGAAGCTCTTCTGTCAACTGAAAAACTTGTCCCTTCTGCTGTGCTCAACAAGATAAGAGTTCCGTATCGTCCAATTG ATTGCAAACTGCATGCACTTTCAGCAGATCGGGACAAATTACCCTCAGGAAAACAGATTCTGGCTCTTACATTAACTTACAAATTCAAAC TGGAGGATGATGCTGAACTGAAGCCTCAGATTCCTTTACTTAACAATCGAATCTATGATAACAAATTTGAGTCTCAGTTTTATATGATAT CGGATGTGAATAAGCGTGTGCATGCTAAGGGTGATGTTTATCCAGATTCTTCCAAACTTCCGAAGGGTGAATATACTGTACAGCTATATC TGAGGGCATGACATGTACAGTACCT |
| RFLP sequence matches to unigenes |
| Unigene | e value | Match length (bp) | Strand |
|---|---|---|---|
| SGN-U147321 | 2.6e-96 | 193 (25.9% of RFLP seq) | - |
| SGN-U147985 | 585 (78.5% of RFLP seq) | - |
 Mapped locations
|
Mapped locations
|  Tomato-EXPEN 1992 |
| Overgo hybridization and physical mapping |
CT278 was used as an overgo probe on plate 4 [well A2]
Plausible BAC Matches: None
Overgo Sequences
|
A sequence
CATTGCAAAGGCCCATTAAGTGGG
|
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B sequence
AATGTGGCCACGCTTTCCCACTTA
|
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AB sequence
CATTGCAAAGGCCCATTAAGTGGGAAAGCG
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Marker sequence
CATTTGTACCAGGCCAAATTGAAAGGAGATTTATTGAGGTACCATTTGGT
GCTACCTGGGTGGAGGCCACCATGAGGACATATGGGTTTGATACGGCTAG AAGATTCTTCATAGATACTGTTCAGCTCTCCCCATTGCAAAGGCCCATTA AGTGGGAAAGCGTGGCCACATTTTCATCACCTTCATCCAAAAACTTTGTG TTTCGAGTGGAGGGTGGTCAGACAATGGAACTAGCAATAGCCCTTTTTTG GTCCAGCGGCATAGGCAGTCATGAAACAACTATTGTTGATTTTGAGATTG CATTCCGTGGTATAAAGATCAGCAAAGAGGAAGTAGTTCTTGATGGAAGC GAAGCACCTGTGAGGATTGATGCTGAAGCTCTTCTGTCAACTGAAAAACT TGTCCCTTCTGCTGTGCTCAACAAGATAAGAGTTCCGTATCGTCCAATTG ATTGCAAACTGCATGCACTTTCAGCAGATCGGGACAAATTACCCTCAGGA AAACAGATTCTGGCTCTTACATTAACTTACAAATTCAAACTGGAGGATGA TGCTGAACTGAAGCCTCAGATTCCTTTACTTAACAATCGAATCTATGATA ACAAATTTGAGTCTCAGTTTTATATGATATCGGATGTGAATAAGCGTGTG CATGCTAAGGGTGATGTTTATCCAGATTCTTCCAAACTTCCGAAGGGTGA ATATACTGTACAGCTATATCTGAGGGCATGACATGTACAGTACCT |
| Genomic location of CT278
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| User comments |
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