SGN Marker CT278
SGN-M670
Synonyms |
Locus associations |
RFLP details |
Insert size
900
|
Vector
pBLUESC
|
Cutting Site
EcoR1
|
Drug Resistance
AMP
|
Image |
Forward sequence
not available
|
Reverse sequence
CATTTGTACCAGGCCAAATTGAAAGGAGATTTATTGAGGTACCATTTGGTGCTACCTGGGTGGAGGCCACCATGAGGACATATGGGTTTG
ATACGGCTAGAAGATTCTTCATAGATACTGTTCAGCTCTCCCCATTGCAAAGGCCCATTAAGTGGGAAAGCGTGGCCACATTTTCATCAC CTTCATCCAAAAACTTTGTGTTTCGAGTGGAGGGTGGTCAGACAATGGAACTAGCAATAGCCCTTTTTTGGTCCAGCGGCATAGGCAGTC ATGAAACAACTATTGTTGATTTTGAGATTGCATTCCGTGGTATAAAGATCAGCAAAGAGGAAGTAGTTCTTGATGGAAGCGAAGCACCTG TGAGGATTGATGCTGAAGCTCTTCTGTCAACTGAAAAACTTGTCCCTTCTGCTGTGCTCAACAAGATAAGAGTTCCGTATCGTCCAATTG ATTGCAAACTGCATGCACTTTCAGCAGATCGGGACAAATTACCCTCAGGAAAACAGATTCTGGCTCTTACATTAACTTACAAATTCAAAC TGGAGGATGATGCTGAACTGAAGCCTCAGATTCCTTTACTTAACAATCGAATCTATGATAACAAATTTGAGTCTCAGTTTTATATGATAT CGGATGTGAATAAGCGTGTGCATGCTAAGGGTGATGTTTATCCAGATTCTTCCAAACTTCCGAAGGGTGAATATACTGTACAGCTATATC TGAGGGCATGACATGTACAGTACCT |
RFLP sequence matches to unigenes |
Unigene | e value | Match length (bp) | Strand |
---|---|---|---|
SGN-U147321 | 2.6e-96 | 193 (25.9% of RFLP seq) | - |
SGN-U147985 | 585 (78.5% of RFLP seq) | - |
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| ![]() Tomato-EXPEN 1992 |
Overgo hybridization and physical mapping |
CT278 was used as an overgo probe on plate 4 [well A2]
Plausible BAC Matches: None
Overgo Sequences
A sequence
CATTGCAAAGGCCCATTAAGTGGG
|
B sequence
AATGTGGCCACGCTTTCCCACTTA
|
AB sequence
CATTGCAAAGGCCCATTAAGTGGGAAAGCG
|
Marker sequence
CATTTGTACCAGGCCAAATTGAAAGGAGATTTATTGAGGTACCATTTGGT
GCTACCTGGGTGGAGGCCACCATGAGGACATATGGGTTTGATACGGCTAG AAGATTCTTCATAGATACTGTTCAGCTCTCCCCATTGCAAAGGCCCATTA AGTGGGAAAGCGTGGCCACATTTTCATCACCTTCATCCAAAAACTTTGTG TTTCGAGTGGAGGGTGGTCAGACAATGGAACTAGCAATAGCCCTTTTTTG GTCCAGCGGCATAGGCAGTCATGAAACAACTATTGTTGATTTTGAGATTG CATTCCGTGGTATAAAGATCAGCAAAGAGGAAGTAGTTCTTGATGGAAGC GAAGCACCTGTGAGGATTGATGCTGAAGCTCTTCTGTCAACTGAAAAACT TGTCCCTTCTGCTGTGCTCAACAAGATAAGAGTTCCGTATCGTCCAATTG ATTGCAAACTGCATGCACTTTCAGCAGATCGGGACAAATTACCCTCAGGA AAACAGATTCTGGCTCTTACATTAACTTACAAATTCAAACTGGAGGATGA TGCTGAACTGAAGCCTCAGATTCCTTTACTTAACAATCGAATCTATGATA ACAAATTTGAGTCTCAGTTTTATATGATATCGGATGTGAATAAGCGTGTG CATGCTAAGGGTGATGTTTATCCAGATTCTTCCAAACTTCCGAAGGGTGA ATATACTGTACAGCTATATCTGAGGGCATGACATGTACAGTACCT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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