SGN Marker C2_At1g27340

SGN-M6721
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311899 (SGN)
127667 (CGN)		---
Capsicum annuumSingleSGN-U204002---
Lycopersicon CombinedMultipleSGN-U219984---
Solanum tuberosumSingleSGN-U250975---
ArabidopsisSingleAt1g27340 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25126)
Chromosome
1
Position
9.50 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41068
Forward primer (5'-3')
AGGAACTCATTGGACAAGTTAAACAAC
Accessions and product sizes
Solanum lycopersicum TA209
250
Solanum pennellii TA56
250
Approximate temperature
55°C
Reverse primer (5'-3')
AGGTATAGTAGGATGATGCCATTTCTTC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
250
Solanum pennellii TA56
150
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At1g27340  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6721 marker 6721
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