SGN Marker C2_At1g28140

SGN-M6730
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeMultiple301897 (SGN)
123122 (CGN)
---
Capsicum annuumSingleSGN-U202113---
Lycopersicon CombinedSingleSGN-U219712---
Solanum tuberosumSingleSGN-U247283---
ArabidopsisSingleAt1g28140 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38150)
Chromosome
5
Position
58.20 cM
Confidence
F(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39435
Forward primer (5'-3')
ATGAGTAACTTGATTGAGAAAAACCTTG
Accessions and product sizes
Solanum lycopersicum TA209
1400
Solanum pennellii TA56
1425
Approximate temperature
60°C
Reverse primer (5'-3')
TGACAAATGTCAGAAGACCAGCTTCC
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
1400
Solanum pennellii TA56
1100
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25135)
Chromosome
1
Position
9.83 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g28140  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6730 marker 6730
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