SGN Marker SSR4
SGN-M677
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 50 High: 50
Repeat motif: CGG Repeat number: 7
Repeat motif: Repeat number:
Forward primer: TTCTTCGGAGACGAAGGGTA
Reverse primer: CCTTCAATCCTCCAGATCCA
Predicted size: 166
Derivations |
This marker was derived from EST read SGN-E123100
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| ![]() Potato meta-QTL consensus map |
| ![]() Tomato-LXCHM 2007 |
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR4 was used as an overgo probe on plate 15 [well D9]
Plausible BAC Matches: P034L18
Overgo Sequences
A sequence
CTTATGATGCTGCAGCTCGAACTC
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B sequence
GCTTTAGGTCCACGAAGAGTTCGA
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AB sequence
CTTATGATGCTGCAGCTCGAACTCTTCGTG
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Marker sequence
GCTTTCTTCTTTTCTCTCTCTAAAATTCTCATCCAAAAACGACCACACAA
TACAGTAGAGAGAGAAAATCAAATCGAAGATTTTACAGAAGGATATCGAG TTTCTTCGGAGACGAAGGGTAGCTTAATCCTCCATTCGATCTCAAAAGGG GAGGTGTGATTTTTTTATTTTTTATTTTAAAATAATTTTTGGATATGAGA AGAGGCAGAGCAACTCCGGCGGCGGCGGCGGCGGCGGTGAAGCCAGATGG ATCTGGAGGATTGAAGGAGATTAGGTTTCGTGGAGTTCGGAAGAGGCCAT GGGGGAGATTTGCTGCAGAGATTAGAGATCCATGGAAGAAAACTAGGGTT TGGTTAGGTACTTTTGATTCAGCTGAAGATGCTGCCAAAGCTTATGATGC TGCAGCTCGAACTCTTCGTGGACCTAAAGCTAAAACTAATTTCCCTTTAC CTATGTATTCTCAGCATCATCAGTTCAATCGAAGTTTAAACCCTAATGAT CGGTTAGTTGACCCGAGATTGTACTCACAAGAAGCTCCGATCATTTGTCA AAGACCTACATCGAGCAGTATGAGTAGTACTGTGGAATCATTCAGTGGAC CGAGA |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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