SGN Marker C2_At1g52220

SGN-M6852
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U197006---
Lycopersicon CombinedMultipleSGN-U217072---
Solanum tuberosumSingleSGN-U254548---
ArabidopsisSingleAt1g52220 on TAIR---
Mapped locations  
Map: Tobacco N. acuminata   
Map version
89 (location: 46443)
Chromosome
6
Position
91.90 cM
Confidence
CF(LOD3)
Protocol
PCR


Tobacco N. acuminata

Map: Tomato-EXPEN 2000   
Map version
52 (location: 38197)
Chromosome
6
Position
44.00 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39475
Forward primer (5'-3')
TCCCCACCACAAGACAAGGTCACCTGG
Accessions and product sizes
Solanum pennellii TA56
550
Solanum lycopersicum TA209
650
Approximate temperature
55°C
Reverse primer (5'-3')
ACCCAATTACAGCAATCCGGTCTTCAG
Digested band sizes (using unknown enzyme)
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25261)
Chromosome
1
Position
19.46 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At1g52220  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6852 marker 6852
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