SGN Marker C2_At1g54460

SGN-M6870
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302309 (SGN)
120455 (CGN)
---
Solanum tuberosumSingleSGN-U246925---
ArabidopsisSingleAt1g54460 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38203)
Chromosome
1
Position
95.50 cM
Confidence
I
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 41107
Forward primer (5'-3')
ACACAAAGTTAGAGGAAAAACACAAAGC
Accessions and product sizes
Solanum lycopersicum TA209
550
Solanum pennellii TA56
550
Approximate temperature
55°C
Reverse primer (5'-3')
ACTTAGATTTGGTGATTTGGCACGAG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
325
Solanum lycopersicum TA209
450
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25279)
Chromosome
1
Position
20.35 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g54460  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6870 marker 6870
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