SGN Marker C2_At1g62250

SGN-M6926
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle311537 (SGN)
127721 (CGN)
---
Capsicum annuumSingleSGN-U196207---
Lycopersicon CombinedSingleSGN-U239604---
Solanum tuberosumSingleSGN-U250268---
ArabidopsisSingleAt1g62250 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38223)
Chromosome
2
Position
70.70 cM
Confidence
I(LOD2)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39495
Forward primer (5'-3')
ACAAGATACTACTTCACCTGAAAATGAG
Accessions and product sizes
Solanum pennellii TA56
1500
Solanum lycopersicum TA209
1500
Approximate temperature
55°C
Reverse primer (5'-3')
TGTACATAGGATGGTGATGAATATAATG
Digested band sizes (using amplicon difference)
Solanum lycopersicum TA209
800
Solanum pennellii TA56
1500
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25338)
Chromosome
1
Position
23.00 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g62250  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D6926 marker 6926
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