SGN Marker C2_At1g69523

SGN-M7006
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle302607 (SGN)
120212 (CGN)
---
Lycopersicon CombinedSingleSGN-U231308---
Solanum tuberosumSingleSGN-U252192---
ArabidopsisSingleAt1g69523 on TAIR---
Mapped locations  
Map: Tomato-EXPEN 2000   
Map version
52 (location: 38250)
Chromosome
6
Position
98.00 cM
Confidence
CF(LOD3)
Protocol
CAPS


Tomato-EXPEN 2000

PCR data   Exp. ID 39521
Forward primer (5'-3')
TCCAAGGCCAGATTGGTACGAGGAGTT
Accessions and product sizes
Solanum pennellii TA56
450
Solanum lycopersicum TA209
450
Approximate temperature
55°C
Reverse primer (5'-3')
TGTTTGGCCTGACCTCTTAGATTAGCAA
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
225
Solanum lycopersicum TA209
325
Mg+2 concentration
1.5mM
   Enzymes
  

Map: Arabidopsis COSII   
Map version
44 (location: 25419)
Chromosome
1
Position
26.13 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At1g69523  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7006 marker 7006
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