SGN Marker SSR38
SGN-M711
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 40.909 High: 40
Repeat motif: TCT Repeat number: 8
Repeat motif: Repeat number:
Forward primer: GTTTCTATAGCTGAAACTCAACCTG
Reverse primer: GGGTTCATCAAATCTACCATCA
Predicted size: 237
Derivations |
This marker was derived from EST read SGN-E98332
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| ![]() Potato meta-QTL consensus map |
| ![]() Sun1642 x LA1589 |
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| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
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| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR38 was used as an overgo probe on plate 12 [well B11]
Plausible BAC Matches: None
Overgo Sequences
A sequence
AGCAGAAGATTACCCTTTGAGACC
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B sequence
AGCAGCAACAGTTCCAGGTCTCAA
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AB sequence
AGCAGAAGATTACCCTTTGAGACCTGGAAC
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Marker sequence
TTCAAAATGAACTCACCATCAACAGCAACAAGAAGAAGAAGACCATGTTT
CGTTGAAGAAGATGATGGTCTTGTTTCTATAGCTGAAACTCAACCTGAGT TCTCAGGCAATAATAATCAAAATCATATTAATAATAATAATAATAACAAT AACAAGAATCATAATTTGATTTATAGACCTCTTTATTATTCAAGAAGAAA TAGCATGAAGAATCACTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTTGT TGTCTCCAAGATCTGTTATTTCTGCTGGAAAATACTGTGATGGTAGATTT GATGAACCCCATCACTATTTCTTGGATGCTTGTTCTCTTTGTAAGAAAAG ACTTGGTGATAACAGTGACATCTTCATGTACAGAGGGGACACTCCATTCT GTAGTGAAGAGTGTAGACAACAAGAAATAGAGAAGGATGAAGCTCAAGAT AGAAAAAGAAACATTTCTTCTTTAAAAGCTATGAGAAAAAAGGAACAAAA ACAACAATCAACATCTCCAAACAAAACTTCAGCAGAAGATTACCCTTTGA GACCTGGAACTGTTGCTGCTGCTTGAGCAAAAAATGATAAATGAATCTAC TTGGATGAAG |
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User comments |
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