SGN Marker SSR48
SGN-M721
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 50 High: 50
Repeat motif: CAC Repeat number: 7
Repeat motif: Repeat number:
Forward primer: ATCTCCTTGGCCTCCTGTTT
Reverse primer: GTCATGGCCACATGAATACG
Predicted size: 199
Derivations |
This marker was derived from EST read SGN-E177066
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR48 was used as an overgo probe on plate 2 [well E1]
Plausible BAC Matches: P282H10, P181H03, P055F06, P166G24
Overgo Sequences
A sequence
GGCCTTTTGGACTTCTCATCTCCT
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B sequence
GAAAAACAGGAGGCCAAGGAGATG
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AB sequence
GGCCTTTTGGACTTCTCATCTCCTTGGCCT
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Marker sequence
GGGATGGCCTTTTGGACTTCTCATCTCCTTGGCCTCCTGTTTTTCTTTCT
ACTAATTATCAATCAAATTTCCTTCATCACCACCACCACCACCACCACCC GCGTTGGCGTTATCTTGAAACCAACTTTCCTACATGTTCCCGTCTTTCGG GAAGCGCCTGCTTTTCGCAATGGGAGGGATTGTGGTTCGTCCGCTGCGGA CCGTATTCATGTGGCCATGACTCTTGATGCTAATTATTTGAGAGGTATTG TTGTTGAAATGTACCATGGCTGCAGTATTATCCATCCTACAACATTCAAC ATGTCCAGAAGATGTCATGTTTCACTTTTTATGTGTAAGACATGAACCTG TGGTATTTTCTAGCATTAAGTCCACTTTCCCTTACCTCAACTTCAAGCTC TACAAATTTGATGT |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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