SGN Marker SSR61
SGN-M734
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 50 High: 45
Repeat motif: GA Repeat number: 24
Repeat motif: Repeat number:
Forward primer: ATGCCTTATGGAAACAACGC
Reverse primer: CGGGTGTACGAATGTCTTTG
Predicted size: 237
Derivations |
This marker was derived from EST read SGN-E56863
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR61 was used as an overgo probe on plate 11 [well A1]
Plausible BAC Matches: P245J07, P242I01, P153H19, P108N12, P213G13, P162L13, P141O05, P004I15, P253J17, P186O04, P035J07, P226H22, P152B04, P253K16, P156M12, P197J06, P114N14, P256M10, P017M12, P124P20, P197A14, P060A06, P195C20
Overgo Sequences
A sequence
ACGCTACTTTTTCATGCTCACATC
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B sequence
AGGGAGAAACTCCAGTGATGTGAG
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AB sequence
ACGCTACTTTTTCATGCTCACATCACTGGA
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Marker sequence
AGACTGTAAATCAATTACTTAGTAGACAAATGCAGATGATTGAGTCAACT
TTCAGGATGATTTTAAGATCCCAATACATGATGTGATGATGAACAGAACC CTACCCACCCCACCACAAAACAAGATCAAGTTTCTGGCCTATGCCTTATG GAAACAACGCTACTTTTTCATGCTCACATCACTGGAGTTTCTCCCTCTTT TATACATTCCTCCATTCTACATCTTCTGATACTTAGAAATGGTGCACAAC AATTTATGTGACAAACTTAAATTGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGCGAGAGTG TTATTTACAAAGACATTCGTACACCCGTTGTTCAAAAG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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