SGN Marker SSR65
SGN-M738
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 42.857 High: 50
Repeat motif: AG Repeat number: 5
Repeat motif: TG Repeat number: 7
Repeat motif: Repeat number:
Forward primer: GGCAGGAGATTGGTTGCTTA
Reverse primer: TTCCTCCTGTTTCATGCATTC
Predicted size: 230
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| ![]() Sun1642 x LA1589 |
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| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
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| ![]() Tomato-LXCHM 2007 |
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| ![]() Tomato-EXPIMP 2008 |
| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR65 was used as an overgo probe on plate 8 [well B10]
Plausible BAC Matches: P245J01, P156P05, P329N17, P324B14, P233G14, P287L07, P014I13
Overgo Sequences
A sequence
CTGATGTTTTGGACCCAGCTCTTC
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B sequence
AATCGACCAGGACGAAGAAGAGCT
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AB sequence
CTGATGTTTTGGACCCAGCTCTTCTTCGTC
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Marker sequence
GCACGAGGTTGGATGGATTTGACCAGCTTGGAAAGGTTTATATTGATCTT
AAATGTATATTTCCATGAAAATGTGTTGTGATTGTCCATGATCTAAGATG TGCATCCTTTCGAGTTTCTCTTTGAACTCTCTTAGTTTGATTTTCCCTGC CGTGTCAAAAAGATTTCTTCAAGTTGGTTTTTTTTTATTTAAGGCAGGAG ATTGGTTGCTTATCAACATACTGTTGGAATCTGCACATAAAACGATACAC CATTTAAATGACCCTATGCTTATGTTTTCTTTCTTGGTTTTTTCTTTTGG GTGCTTGTTTTTTTTTTTTGTGTGTGTGTGTGAGAGAGAGAGACCTTAGG GCTTAGATTCTTTTTGATTTATAACATTTGAAATTTCCTAAAGAAAGAGT AGAATGCATGAAACAGGAGGAAGATATTGTCTGTTCACCTGAACCTATTT AATCATTATTCTATCTTCAGGTAAAAATGATTATGGCAACAAATAGACCT GATGTTTTGGACCCAGCTCTTCTTCGTCCTGGTCGATTAGATAGAAAGAT AGAAATCCCCTTGCCTAATGAACAATCAAGAATGGAAATCCTCAAGATCC ATGCTGCTGGGATTGCCAAACATGGTGAAATTGATTATGAGGCTGCTG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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