Sol Genomics Network

SGN-M7425
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

Synonyms

None

Locus associations

None

Orthologs in this COSII group

Species	Copies	Sequence ID	CDS/Edited sequence	Peptide sequence	Predicted introns
Coffee	Single	302562 (SGN) 120796 (CGN)	-	-	-
Lycopersicon Combined	Single	SGN-U240727	-	-	-
Arabidopsis	Single	At2g37035 on TAIR	-	-	-

Arabidopsis COSII

PCR data Exp. ID 41278

Forward primer (5'-3')

ACTCGAGGAAAAGTGGTAGGGAGG

Accessions and product sizes

Approximate temperature

Unknown

Reverse primer (5'-3')

AGGATGCATCATTATACCTTGCAGC

Digested band sizes (using unknown enzyme)

Mg⁺² concentration

1.5mM

Enzymes

Other PCR data

PCR data Exp. ID 10803
Forward primer (5'-3') ACTCGAGGAAAAGTGGTAGGGAGG		Mg⁺² concentration 1.5mM
Reverse primer (5'-3') AGGATGCATCATTATACCTTGCAGC	Enzymes
Accessions and product sizes Solanum pennellii LA716: 250	Approximate temperature 55°C

PCR data Exp. ID 10804
Forward primer (5'-3') ACTCGAGGAAAAGTGGTAGGGAGG		Mg⁺² concentration 1.5mM
Reverse primer (5'-3') AGGATGCATCATTATACCTTGCAGC	Enzymes
Accessions and product sizes Solanum lycopersicum LA925: 250	Approximate temperature 55°C

PCR data Exp. ID 10805
Forward primer (5'-3') ACTCGAGGAAAAGTGGTAGGGAGG		Mg⁺² concentration 1.5mM
Reverse primer (5'-3') AGGATGCATCATTATACCTTGCAGC	Enzymes
Accessions and product sizes Solanum pimpinellifolium LA1589: 250	Approximate temperature 55°C