SGN Marker SSR70
SGN-M743
Synonyms |
Locus associations |
SSR info |
Annealing temperatures: Low: 60 High: 55
Repeat motif: AT Repeat number: 20
Repeat motif: Repeat number:
Forward primer: TTTAGGGTGTCTGTGGGTCC
Reverse primer: GGAGTGCGCAGAGGATAGAG
Predicted size: 120
Derivations |
This marker was derived from EST read SGN-E161275
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| ![]() Sun1642 x LA1589 |
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| ![]() Integrated map: Yellow Stuffer X LA1589 and Sun1642 X LA1589 |
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| ![]() Tomato-EXPEN 2000 |
Other PCR data |
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Overgo hybridization and physical mapping |
SSR70 was used as an overgo probe on plate 16 [well D3]
Plausible BAC Matches: P121A19, P243L15, P153F02
Overgo Sequences
A sequence
CGTACACTCTATCCTCTGCGCACT
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B sequence
AGAATCCCACAAGTGGAGTGCGCA
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AB sequence
CGTACACTCTATCCTCTGCGCACTCCACTT
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Marker sequence
GATCAAGCTAGCCAACACTATTATCAATACCAATTTCAGTATTCAAAGCC
TCATGTTGCTGTTTCAGCTACTGCTTCTTCCTATAATAATAACCATCACA ATCACAAGGATATGAATTTCTCAAGAGATGTCAACCAGATGAGATATCAC CAGGGATAAGATCTGTAGATTTGACAACCAGGATTGACTATTACAGGCAC TTGGAATTTATTTTTAGTTTTTTCTTTAAAGAAAAAATTCTTGAAAAAAT AGGAAAAGAAAATCCAAAAAGGGTAAAAATCCCAGATTTTCTGGCAACTT TCTCCCCCTAGAAAAAGGTAGTATATATCACAGAACTTTTAACACCTATT CCAAGTCCACAGGAAATTGAAAGAATGAAAATATTGGAGATGAAACTTTG AAAGAGACTTTAGGGTGTCTGTGGGTCCATCAGATTATAGCTGAAGAGAT GAAAGAATATATATATATATATATATATATATATATATATATATATGGTC TACGTACACTCTATCCTCTGCGCACTCCACTTGTGGGATTCTGTCGGGGT ATTTTGTTGTATTTTGGTTGCTACTGTGGAGATTCTGCCTGAAGATTTTT GTTAGGGGGCTTCATCATAATCATGACAATTGACCAAAACTGAAGGATAG TAATAGTGAGAAGAAGAAGAAAGATGGTTCTTTTACCAAGTGGTGATGGT AGTGGTAGTGGG |
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Related Genotyped Markers: These markers have been genotyped and share a name with this marker
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User comments |
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