SGN Marker C2_At2g39725

SGN-M7464
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
Capsicum annuumSingleSGN-U202479---
Lycopersicon CombinedSingleSGN-U226625---
ArabidopsisSingleAt2g39725 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 25886)
Chromosome
2
Position
16.58 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41293
Forward primer (5'-3')
ATGGGAGCTTCCAGTGGACCAA
Accessions and product sizes
Solanum pennellii TA56
450
Solanum lycopersicum TA209
450
Approximate temperature
55°C
Reverse primer (5'-3')
ACCTGTTGTTTGTGAAGAATCAACACTT
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
250
Solanum lycopersicum TA209
200
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Related Markers  

Related Genotyped Markers: These markers have been genotyped and share a name with this marker
Genomic location of C2_At2g39725  
 %2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7464 marker 7464
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