SGN Marker C2_At3g04890

SGN-M7619
COSII markers are Conserved Ortholog Set II - orthologs between many asterid species

SynonymsNone
Locus associationsNone
Orthologs in this COSII group 
SpeciesCopiesSequence IDCDS/Edited sequencePeptide sequencePredicted introns
CoffeeSingle300923 (SGN)
124433 (CGN)
---
Lycopersicon CombinedSingleSGN-U230867---
ArabidopsisSingleAt3g04890 on TAIR---
Mapped locations  
Map: Arabidopsis COSII   
Map version
44 (location: 26044)
Chromosome
3
Position
1.35 MB
Confidence
uncalculated
Protocol
CAPS


Arabidopsis COSII

PCR data   Exp. ID 41336
Forward primer (5'-3')
TCAAACTTCCATGGCAGCCTCTC
Accessions and product sizes
Solanum lycopersicum TA209
425
Solanum pennellii TA56
450
Approximate temperature
55°C
Reverse primer (5'-3')
AAATCTGGCCAACGGCTTCAAG
Digested band sizes (using amplicon difference)
Solanum pennellii TA56
450
Solanum lycopersicum TA209
425
Mg+2 concentration
1.5mM
   Enzymes
  
Universal primers for Asterid species 
No additional PCR data found.
Genomic location of C2_At3g04890  
%2Fsearch%2Fmarkers%2Fmarkerinfo.pl%3Fmarker_id%3D7619 marker 7619
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